Arabidopsis thaliana (thale cress): AT3G20800
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Entry
AT3G20800 CDS
T00041
Name
(RefSeq) Cell differentiation, Rcd1-like protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT3G20800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G20800
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AT3G20800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
821628
NCBI-ProteinID:
NP_188716
TAIR:
AT3G20800
UniProt:
A0A384KHS9
Q8RWV5
LinkDB
All DBs
Position
3:complement(7271137..7274013)
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AA seq
316 aa
AA seq
DB search
MANLPSSLSMGTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHS
DTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVEQP
SPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHNVG
VGRVPTHQGGGFEHML
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctaccttcttctctctccatgggcacacctttcggtggtcctagcacctcc
gcacaaaatcctaccggagctccggccaacaaagatcgcaatttggcctctgctgaacag
ttggtactcgatctcagcaatcctgaactcagagaaaatgctcttctcgagctttccaag
aaaagagaattgtttcaggatctggcgcctttgttgtggaactcttttggtaccattgct
gccttgttacaggagattgtatcaatctactctgttcttgcacctccaaatctgactcct
gctcagtccaaccgtgtttgcaactcgctcgctcttcttcagtgcgtagcatctcattct
gacacgagaatgttatttctcaaggctcatatcccgttgtacctttatcccttccttaat
acaacgagtaagtccagacctttcgaatacttgcggcttactagcctaggtgtcatcggt
gcacttgtgaaggttgatgatacagaggtcattagcttccttctttcaactgaaattatt
cctctgtgcctccgtaccatggaaatggggagtgagctgtcaaaaacagtggcaacattt
attgttcaaaagatactgttggatgatgtggggatggattacatctgcacaacagcagag
cggttttttgcagttggtcgagtgttgggaaatatggttcagtcacttgtggagcagcct
tctccgcgccttttgaagcatatcattcgttgctatctccgtttatcagacaacccaagg
gcttgtgctgcactcgcaagctgtctccctgactcgctacgagatggatcctttagcaat
tgtcttcgcgaggatccaactgcaagaaggtggctgcaacagttggtgcacaatgttgga
gttggtcgcgtcccaacacatcaaggtggaggatttgagcacatgctttga
DBGET
integrated database retrieval system
