Arabidopsis thaliana (thale cress): AT3G23100
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Entry
AT3G23100 CDS
T00041
Symbol
XRCC4
Name
(RefSeq) DNA ligase IV-binding protein
KO
K10886
DNA-repair protein XRCC4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AT3G23100 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G23100 (XRCC4)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AT3G23100 (XRCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
821885
NCBI-ProteinID:
NP_188951
TAIR:
AT3G23100
UniProt:
Q682V0
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All DBs
Position
3:8220682..8226400
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AA seq
264 aa
AA seq
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MIGVDSKSSSTTFIETMVESEKTKHTCLRLEISGADPIFVKGTWHNSRFDISVTDGSSSW
ICNATEEEVAERAAQWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEG
TKLEWRWKCKPSDDSKKITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEK
LCDEKTEFESATYAKFLSVLNAKKAKLRALRDKEDSVRVVEEEESTDKAESFESGRSDDE
KSEEEASKKATSSKARGGKRAARS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagttgactcaaaatcttcgtcgacgacttttatcgaaacaatggttgaatcg
gagaaaacgaaacacacttgtctccgtctcgaaatctccggcgccgatccaattttcgtc
aaaggcacttggcataattctcgtttcgatatctccgtcaccgatggttcctcctcttgg
atttgcaatgcgacggaggaggaagtggcggagagagcagcacaatgggaccagcctgtg
tcagagtatttaaagctcgccgagcaatacttagggtttcaacaacctaattcggtctat
agtttctccgatgctctagagggatctaaacggctctcttggacgtttgagaaggaaggg
actaaacttgagtggaggtggaaatgtaaaccatcagatgatagcaagaagatcactgtt
gggatcttggattttcttatggaggctaacataaggctaagtgaagaagtggtgaacaag
acgagatcttttgagaagatgagaagtgaagctgagagatgtctagcgcaaggtgaaaaa
ctctgtgacgaaaaaacagagtttgagagtgcaacttatgcaaagtttctttctgtttta
aatgcaaagaaggcaaaactgagagcactaagggacaaagaagattcagtgagagtagtt
gaggaggaagagtcgacagacaaagctgaaagctttgagagtggaagaagtgatgatgag
aagagcgaggaagaagcctcaaaaaaggcaacaagcagcaaagcccgtggcgggaagaga
gctgcacgaagctaa
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