Arabidopsis thaliana (thale cress): AT3G23780 Help Entry AT3G23780         CDS       T00041                                  Symbol NRPD2A Name (RefSeq) nuclear RNA polymerase D2A   KO K16252   DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] Organism ath  Arabidopsis thaliana (thale cress) Pathway ath03020   RNA polymerase Brite KEGG Orthology (KO) [BR:ath00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     AT3G23780 (NRPD2A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ath03021]     AT3G23780 (NRPD2A) Enzymes [BR:ath01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      AT3G23780 (NRPD2A) Transcription machinery [BR:ath03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol IV and V specific subunits      AT3G23780 (NRPD2A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77 DUF2002 Motif Other DBs NCBI-GeneID:  821960 NCBI-ProteinID:  NP_001189957 TAIR:  AT3G23780 UniProt:  Q9LK40 A0A178VA17 Structure PDBPDBj LinkDB All DBs Position 3:complement(8567572..8574209) Genome browser AA seq 1172 aa AA seqDB search MPDMDIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFI EHGLQNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWH ARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMV KSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPWTVSFR SENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAF DGDDASITNSLIASIHVADAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLHLYLFP GLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARR KMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVVANLGR ANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLV STQSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQ SELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLDHGILE LIGIEEEEDCNTAWGIKQLLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLYQSQ KHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHL GYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGKVD SLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEGKNFAAV SLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQL LEAALSKGIACPIQKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYNG RSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER DCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCVSSD HVVRVYVPYGAKLLCQELFSMGITLNFDTKLC NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgccagatatggacattgatgtgaaggatcttgaagagttcgaggctactactggggag atcaatctatctgagctaggagaaggttttctgcagagtttctgcaaaaaagctgcaact tctttctttgataagtatggacttataagtcatcagctcaactcctacaactacttcatt gaacacgggcttcagaatgtgtttcaatcctttggtgagatgcttgtggaaccgtctttt gatgttgtaaagaagaaggataatgattggagatacgcaacggtgaagttcggagaagtc actgtggagaagcctactttcttttcggatgacaaggagcttgagtttctcccatggcat gctaggcttcagaacatgacatactctgcaaggatcaaagtcaatgtccaagttgaggtg ttcaagaatactgttgttaaaagcgacaaattcaagacaggacaagacaactatgtcgag aagaagatactggatgtcaaaaagcaggacattctaattggtagcattcctgtcatggtg aaatctatcctttgcaaaacaagcgagaaagggaaagaaaactgcaaaaagggggattgt gcctttgatcagggtggatatttcgtgataaagggggctgagaaggtgtttatagctcaa gaacagatgtgcacaaagagactgtggatttctaattcaccatggacagtctccttcagg tccgaaaataaaagaaatagattcattgtgcgcctctcggagaatgagaaagcagaagac tataagagaagggagaaagtactgacagtgtacttcttgtcgactgagattccagtctgg ctcctcttctttgcgctaggtgtttcgtcagacaaagaagccatggatctaattgctttt gatggtgatgatgcaagcattaccaacagtctcatagcttctatccatgtagctgatgca gtttgtgaagcttttcgctgtgggaacaatgctttaacatatgttgaacagcagatcaaa agcaccaaattccctcctgctgaaagtgtggatgagtgcctccatctgtatttgtttcca ggcctccaaagtttgaagaagaaagctcgattcctgggctatatggtgaagtgccttctg aactcgtatgcgggaaaaagaaaatgcgaaaacagggacagtttccggaataagcgaatt gagctcgctggagaactattggagagggagataagggtgcatctggcacatgctagaaga aagatgaccagggccatgcagaaacacctctcaggcgatggtgatttgaagcctattgag cattatttggatgcttctgttatcacaaatgggcttagtagagccttctctactggagca tggtctcatcctttcaggaagatggaaagggtttcaggtgttgtggctaatttgggtcgt gcaaatccattgcagactctgattgatctgaggagaacgcgacagcaagtcttatatacc ggcaaggttggagatgctagatatccgcacccctctcactggggcagagtatgctttttg tcaactccagacggtgaaaattgtggtcttgtgaagaacatgtctcttctgggacttgtg agcacccaaagtttggagtctgtggtggaaaagctcttcgcttgtggaatggaagagctg atggatgatacatgcacaccattgtttggcaaacataaagttcttctcaatggagactgg gttggattatgtgcagattctgaatcctttgtcgcggagttaaaaagcaggcggcgccaa agtgaattacctcgtgagatggaaatcaagcgagataaagatgacaatgaggtaagaatt ttcactgatgctggtagactactccgacctctcttggttgtggaaaatctccaaaagttg aagcaagaaaaaccttcacagtatccttttgaccatcttcttgaccatgggattctcgag ctgatcgggattgaggaagaagaagactgtaatacagcatggggaatcaaacagcttctg aaggaaccaaagatatacacacattgcgaattggacctgtcattcttgttgggtgtgagc tgtgcagttgtcccatttgcaaatcacgaccatgggagaagagttctctaccagtcccag aagcactgccaacaagccattggattctcatcaacgaaccctaacatccgctgcgatacg ctgtcccagcagctgttctatcctcagaagccactgttcaagacattggcgtcggagtgt cttaaaaaagaagtgctgttcaatggccagaacgcaattgttgctgtgaatgttcatctc gggtacaaccaagaggattccattgtgatgaacaaggcttcattggaacgtggtatgttc cgttcagagcagattagaagctacaaagcagaggttgatgctaaagactcagagaagagg aagaagatggatgagcttgttcagtttggaaagacacacagcaaaatcggcaaagtagac agccttgaagatgacgggtttcctttcattggtgctaacatgagtactggcgatattgtc attggcagatgcaccgagtctggggctgatcacagtataaagctcaagcacactgagaga ggaattgtgcaaaaagtggtattatcatctaatgatgaagggaagaattttgctgcggtt tctctgagacaggttcgttctccatgccttggagataagttttccagtatgcatggccag aagggtgttttaggctacctagaggaacagcagaattttcctttcacgatccaaggcata gttcctgatattgtgataaacccgcacgctttcccttctaggcaaacaccaggtcaactc ttggaggctgctctctccaaaggaatcgcttgtcctatacaaaaggagggtagctctgct gcatacaccaaattgacacgtcatgccactcctttctccactccgggtgtcactgaaatc accgagcagcttcacagggccggcttttcaagatggggaaacgaaagggtctacaacggt agatcaggtgagatgatgcgttctatgatattcatgggcccaactttctaccagcgactt gtccacatgtcagaggacaaagtcaagttcaggaacactggaccagtccacccgctcaca cgccagccagttgcagacaggaagagatttggcgggataaaatttggagaaatggagcga gactgcctaatagctcacggtgcatcagctaatctgcatgagcgtctcttcactctaagt gactcttctcagatgcacatctgcagaaaatgtaagacctatgcgaatgtgatcgagagg actccaagcagtggaagaaagattagagggccatattgtagagtctgcgtatcctcagac catgtggttagggtctatgttccgtatggagctaagcttctgtgtcaggagctgttcagc atgggcatcactctcaacttcgacaccaagctatgctga

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