Arabidopsis thaliana (thale cress): AT3G23890
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Entry
AT3G23890 CDS
T00041
Symbol
TOPII
Name
(RefSeq) topoisomerase II
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT3G23890 (TOPII)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G23890 (TOPII)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AT3G23890 (TOPII)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Topoisomerases
AT3G23890 (TOPII)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
AT3G23890 (TOPII)
Centrosome formation proteins
Centriole proteins
AT3G23890 (TOPII)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
821972
NCBI-ProteinID:
NP_189031
TAIR:
AT3G23890
UniProt:
P30182
A0A178VFD9
LinkDB
All DBs
Position
3:8624636..8631392
Genome browser
AA seq
1473 aa
AA seq
DB search
MATKLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ
TLWVYEKDEMVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCN
SGAGVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE
TADGKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALM
SKRVFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRW
EVCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKN
HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVGKSGVVENLLSWADFK
QNKDLKKSDGAKTGRVLVEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNNY
CGVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQD
HDGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRKGTKKVLSFYSMPEYEEWKE
SLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIE
ARKNWLSSYVPGNHLDQRQPKVTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF
VAFKKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFG
TRTSGGKDSASARYIFTKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTWYMPIIPTVLVN
GAEGIGTGWSTFIPNYNPREIVANVRRLLNGESMVPMDPWYRGFKGTIEKTASKEGGCTY
TITGLYEEVDETTIRITELPIRRWNDDYKNFLQSLKTDNGAPFFQDVKAYNDEKSVDFDL
ILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTPEQILEEFFDLRFEYY
EKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVEDLRQKGFTPFPRKAE
SVEAAIAGAVDDDAAEEPEEILVDPESSSSYIPGSEYDYLLAMAIASLTIEKVEELLADR
DKMIIAVADMKKTTPKSLWLSDLESLDKELEKLDLKDAQVQQAIEAAQKKIRAKSGAAVK
VKRQAPKKPAPKKTTKKASESETTEASYSAMDTDNNVAEVVKPKARQGAKKKASESETTE
ASHSAMDTDNNVAEVVKPKGRQGAKKKAPAAAKEVEEDEMLDLAQRLAQYNFGSAPADSS
KTAETSKAIAVDDDDDDVVVEVAPVKKGGRKPAATKAAKPPAAPRKRGKQTVASTEVLAI
GVSPEKKVRKMRSSPFNKKSSSVMSRLADNKEEESSENVAGNSSSEKSGGDVSAISRPQR
ANRRKMTYVLSDSESESANDSEFDDIEDDEDDE
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaacttccccttcaaaacagcaatgccgccaatgttgcgaaagctccggct
aaatctcgagctgccgccggcgggaagacgatcgaggaaatgtatcagaagaaatcgcag
cttgaacacattcttctccgtcctgatacatacatcggatctatcgagaaacacacccaa
acactttgggtttatgagaaagatgagatggttcaacgtcctgttacctatgtacctgga
ttgtataagatctttgatgagattctcgtaaacgccgctgataacaaacagagagatgcg
aagatggattccgttcaagttgtgattgatgttgagcagaatctgattagtgtttgtaac
agtggagctggagttcctgtagagattcatcaggaagaaggaatttatgtaccggagatg
atatttggtcatttgttgacgagtagtaactacgatgataatgtgaagaagaccactggt
ggaagaaacggatatggtgctaagcttactaatatcttctctactgaattcatcatcgag
actgcagatgggaagagactcaagaagtataagcaggtctttgagaacaacatggggaag
aaatctgaaccggttataaccaagtgtaataagagtgagaactggacgaaggttacattc
aaaccagatttgaagaagtttaacatgactgaattagaagacgatgtggttgctctaatg
agtaagcgagtgtttgatattgctggatgtttggggaagtctgtcaaagttgagctgaat
gggaaacaaataccagtgaagtcattcactgattatgttgacctatacctaagtgcagct
aataaatcgaggacggaggatcctctcccaaggttgactgagaaagttaatgatagatgg
gaggtttgtgtgagcttaagtgaaggacaatttcagcaggtcagctttgtcaactccata
gcaacaatcaagggtggtacacatgttgactatgtgacgagtcagattacaaaccatatt
gtggctgctgtgaacaaaaagaataaaaacgcaaatgttaaggcccataatgtgaaaaac
catctgtgggtctttgtcaatgcattgattgacaatcctgcttttgattctcaaacaaaa
gaaacactgactcttcgacagagcagttttgggtcgaaatgtgaactttcagaagatttt
ctgaagaaagttggaaaatctggcgtagtggagaatttgctttcatgggcagatttcaag
cagaacaaagatctaaagaaaagtgatggagccaaaacagggagggttctagttgagaag
ttagacgatgccgccgaagctggagggaagaactctcgactctgtacgttaattttgact
gaaggagactcagcaaaatctctcgctttggcggggaggtctgtcttgggtaataactac
tgcggtgtgtttccgcttcgaggaaagctattgaatgtcagggaagccagcaccactcag
attacaaacaataaggaaattgagaacctcaagaagatccttggactaaagcaaaatatg
aagtacgagaatgttaactcattaagatatggccagatgatgatcatgactgatcaagat
catgatggttctcatataaagggtctcttaatcaattttatccactctttttggccgtcg
ttactccaggttccatcattcctggttgagtttataacacccattgtgaaggctacgcgt
aagggtacaaaaaaagttctgtcattctactcaatgcctgaatacgaagaatggaaagaa
agtctgaagggtaatgcaaccgggtgggatatcaaatactacaaggggttgggtacaagt
acggctgaggagggcaaagagtactttagtaatcttggtcttcacaaaaaggattttgtt
tgggaggatgaacaagatggagaagccattgaacttgctttcagtaaaaagaagatcgaa
gcccggaaaaattggctttcgagctatgtgcctggcaatcatcttgatcagagacaaccg
aaagttacgtacagtgacttcgtgaacaaagaactgatcttgttctccatggcggatctt
caacggtcaattccctcaatggttgatgggctcaaaccgggtcagagaaagatacttttc
gttgcattcaagaaaatcgctcgtaaagaaatgaaggttgcccagctcgttggttatgta
tcattgctgtcagcttatcatcatggcgagcagagtcttgccagtgctatcataggcatg
gcgcaggattacgtgggcagcaacaatatcaacttacttctaccaaatggtcaatttggt
acacgaacttcgggtggaaaagattcagctagtgcaagatacattttcactaagctctct
ccagtaacaaggatcttgtttcccaaggatgatgatctccttcttgattacttgaatgaa
gacgggcaaaggatagagccaacttggtacatgcccatcattccaactgtacttgtcaat
ggcgctgaaggcattggaactgggtggagcacgttcataccaaactataaccctagagag
atcgttgctaatgtaaggcgtttacttaacggtgaaagtatggtgcctatggatccttgg
tatagaggttttaaaggaacaattgagaaaactgcgtccaaagaaggtggttgtacttac
acaatcactggtctatatgaggaggtggatgaaacaactattcgaatcacggagttgcca
atcagaaggtggaatgatgattacaaaaatttcttgcagtcattgaagacagataatggt
gcaccttttttccaggatgtcaaggcttacaatgacgagaaatctgttgattttgacctt
attttgagtgaagagaacatgctggcggctcggcaagagggctttctgaagaaattcaaa
ctcaccacgacaatcgctacaagtaatatgcatctctttgataaaaaaggtgtgataaag
aaatatgtgaccccagaacaaatccttgaagagttctttgacctcaggtttgaatactat
gagaagagaaaggaaaccgtggtgaagaatatggaaattgagctgttgaaactagaaaac
aaagcgaggtttattcttgcagttctcagtggagaaatcatagtgaacaagaggaagaaa
gccgatattgttgaggacttaagacagaaagggttcacaccatttccgaggaaggccgag
tctgtcgaagctgcaattgctggagcagttgatgatgatgcagctgaagaacctgaagaa
atcttagtggatccggagtcaagctccagttatatacccggctcggaatatgactaccta
ttggcaatggctatagcttcgttgactatagagaaagttgaggagttattagcagacaga
gataaaatgattattgcagttgcagacatgaagaaaaccacaccgaaatccctctggctc
agtgacctagagtctcttgacaaggaactagaaaaacttgatctgaaagatgctcaagtc
caacaggctatagaggcagcacagaaaaaaatcagggccaaatctggagcagcagtaaag
gttaaaaggcaggcaccaaagaaaccagcaccaaagaagaccacaaagaaagccagtgaa
tctgagacaacagaggcttcctattcagcaatggacacagataacaacgtagcagaagtg
gtgaagccaaaagctagacaaggagcaaagaagaaagccagtgaatctgaaacaacagag
gcttcccattcagcaatggacacagataacaacgtagcagaagtggtgaagccaaaaggt
agacaaggagcaaagaagaaggctccagcagctgcgaaggaggttgaggaggatgaaatg
ttggatctagcacaacggcttgctcaatacaatttcggctcagcacctgcggattcaagc
aaaacagctgaaacatcgaaagcaattgctgtggatgacgatgatgatgacgtggtagtt
gaggttgcaccagtaaagaaaggaggaaggaaaccggcggcgactaaagctgcaaaacca
ccagcagctccgaggaaacgagggaagcagacagttgcttcaacagaggttctggcaatt
ggtgtgtccccggagaagaaagtgaggaagatgagatcatctccgttcaacaagaagagt
agttcagtgatgagcaggttggctgataataaggaagaggagagcagcgagaatgtggct
ggaaactcatcgtctgagaaatctggaggagatgtttctgcgatatcgaggcctcaaaga
gctaataggaggaaaatgacctatgtgttgagtgattccgagagtgaatctgcgaatgat
tctgagtttgatgacattgaagacgatgaagatgatgagtag
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integrated database retrieval system
