Arabidopsis thaliana (thale cress): AT3G24670
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Entry
AT3G24670 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G24670
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G24670
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
822063
NCBI-ProteinID:
NP_189110
TAIR:
AT3G24670
UniProt:
Q9LJ42
A0A178VLR8
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Position
3:complement(9005939..9008801)
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AA seq
440 aa
AA seq
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MVIFSRSFLALSTTLIILALCINSSTMAQETEDLNSHSSSNSSTANKLPNDDGAWNEHAV
KNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGR
NAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSF
KTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGD
AISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDK
LMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAP
GNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPAS
VVSMLTYSSGALKCRIGMRC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtgatctttagcagaagcttcttagctctctcaacgactctaatcattctagcatta
tgtataaattcatcaacaatggctcaagaaacagaggacctaaactctcatagctcgagt
aattcatcaacggctaataagttacctaacgacgacggtgcatggaatgaacacgcagtt
aaaaacccagaagaagtagctgcaatggtcgatatgaaaataaagaacagtacagagcgg
aggaggttaggattcttctcatgcgccaccggaaacccaatagacgactgttggagatgt
gatcggaattggcatctccgacgaaagcgtctcgcgaattgcgcgatcggattcggtcgt
aacgctatcggaggacgagatggtcgttactacgtagtcacagatccatctgaccacgac
gcggttaatccacgaccaggaacactccgtcacgctgtgatacaagaccgtccgttatgg
atcgtcttcaagcgagacatggtgattactctaactcaagagctaatcatgaacagcttc
aaaacaatcgatggaagaggcgtgaacgttgcaatcgcaggcggtgcttgtattacgatt
cagtatgtgacgaatattatcatccatgggattaatgtacatgattgtagaagaactggt
aatgctatggttcgaagctcgccgtcgcattatgggtggaggactatggcggatggtgat
gctatatcgatatttggatcgagtcatatttggattgatcataactctttgtctaattgt
gctgatggtttgattgatgctattatgggatctactgctattactatctccaataactac
atgactcaccacaacgaggttatgttgatggggcatagtgattcgtacactagagacaag
ttgatgcaagtgacaatagcatataaccattttggggaagggcttatacagagaatgccg
aggtgtagacatggttatttccatgttgtaaacaatgattatactcattgggtaatgtat
gcaattggtggaagtgctaaccctactatcaatagtcaaggcaatcgtttccttgccccg
ggcaaccctttcgccaaagaggtgacaaagagggtaggttcatggcaaggggaatggaag
caatggaactggagatctcaaggagacctaatgctcaacggtgcctacttcactaaatct
ggagctgctgctcctgcaagctatgccagagcctctagcttgggagctaaaccagcttct
gtagtaagtatgcttacctacagctccggtgcccttaaatgcaggatcggtatgcggtgt
tag
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