Arabidopsis thaliana (thale cress): AT3G27400
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Entry
AT3G27400 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G27400
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G27400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
822361
NCBI-ProteinID:
NP_189376
TAIR:
AT3G27400
UniProt:
Q9LTZ0
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All DBs
Position
3:10140200..10143249
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AA seq
412 aa
AA seq
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MVSYSNNHFAYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNASRRSLAYLSC
RTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGT
LRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIII
HGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAI
HGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEG
DMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtattctaataatcattttgcatacgcatttctacttcttctaacaatcggt
aacacgcttgcattttcttcgagtttgccggatcatgttcaagatccaaatctagtcgtt
gacgacgttaacagaagtgtattcaatgcgtcaaggaggagcttggcctacctatcttgt
agaaccggaaatcctattgacgattgttggcggtgtgaccctaattgggaaacaaaccgc
caacggttagcagattgtgccattggatttggcaaaaatgctatcggagggcgcaaaggt
cgaatctatgtagttacggatcctgccaacgacgatcccgtaaaccctagacctgggact
ctaagatatgcagtgacacaagaagaaccattatggatcattttcaagagagatatggtc
attaggctcaaaaaagaacttatcatcacatctttcaagaccattgatggtagaggctcg
agtgttcacattaccgatggaccatgcttaaagatccactatgcaactaacatcataatt
catggcattaacatccatgactgtaaaccaggatcaggtggcatgattaaagatggtcca
catcacaccgggtggtggatgcagtccgatggagacgcggtggcgatatttggagggaaa
cacgtgtggattgaccattgctcgttgtcgaactgcgatgatggactcatagacgctata
catggttccacggctataaccatatcgaacaatcatatgacgcaccatgataaggtcatg
cttttaggacatagcgatagttacacgcaggacaagaacatgcaagtcacaattgcgttt
aaccatttcggagaaggactcgttcaaagaatgccacggtgcaggcatggatatttccat
gtagtgaacaatgattatactcactgggaaatgtatgcaatcggtggaagtgcttctcca
actatatacagccaagggaatagatttcttgctcctaacacccgctttaataaagaggtt
acaaaacatgaagatgcacccgaaagcaaatggagagattggaattggagatcggaaggc
gatatgttgttgaacggagcttatttccgcgagtccggtgctgaagctccgtctacttat
gcaagagcttcaagcctgagtgcgaggccatcgtcacttgtgggttccatcaccacgaca
gcaggcactttgagttgtcggcgaggccgtcgctgttaa
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