Arabidopsis thaliana (thale cress): AT3G29390
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Entry
AT3G29390 CDS
T00041
Symbol
RIK
Name
(RefSeq) RS2-interacting KH protein
KO
K25780
kelch domain-containing protein 4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G29390 (RIK)
Spliceosome [BR:
ath03041
]
Complex B
Other components
Prp19-related factors
AT3G29390 (RIK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
KH_1
Motif
Other DBs
NCBI-GeneID:
822600
NCBI-ProteinID:
NP_566850
TAIR:
AT3G29390
UniProt:
Q9LIA4
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All DBs
Position
3:11289495..11294774
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AA seq
578 aa
AA seq
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MTEDNDEARVPLSDSSTTNDASRTRQRRKRKWDKPAEQLVAAGVAFPQLLPLGNTMNVPS
MSPLLQTLSVPLAVPKVNQPKIQDEVIIAREIVINDAEASLRHRLTKRSTQEDIQRSTGA
VVITRGKYRPPNAPPDGEKPLYLHISAAAQLQLKETTERILAVDRAAAMIEEMMKQKSIS
QIGSVGLQTVKMLSTCVYLGFEADPSSNVAARIRGPNDQYINHIMNETGATVVLRGRGSG
SLENQHGDEAQLPLHLLLSGSNPKSIDDAKRLAENLMDTISVEFGASRVSSSKVYGAVPP
PQQLISGAPGSDQENQNLISTYGLMTSIPITAPPYAVSSFPVTPATSLYPQFPVMQSLGI
SNGGPSQPVAGGTSYSGYAGIYPQATPLQQVAQVLKQSISPVISTVPPTMLTATSLSIPS
DNASNEMERRPPRKRKFQELPADCKVPEKDKQQSELAMTGDVTPSANRVRSPPSPRSVMP
PPPPKTIAPPPSKTMSPPSSKSMLPPPPRSKTMSPLSSKSMLPPPPRFTLTTQRSRLQDN
HISVKKPNPVPDTLIKLMEYGDDEDDDDDPDEPLTTRS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacaacgatgaggctagggttcctctcagcgactcgtctacaacgaacgat
gcttctcgaacgagacaaaggagaaagagaaagtgggataagccagcggagcaacttgtt
gcggctggagttgcgtttcctcagttacttcctttaggcaacactatgaatgttccttct
atgtcaccattgctccaaacgctttcggtgcctctagcagttccaaaagttaatcaacct
aaaatccaggatgaggtgatcatagcgcgagaaattgttatcaacgatgctgaggcttct
cttaggcacaggcttaccaaacgctcaactcaagaagatattcagaggtctaccggtgct
gtggtgattactaggggcaagtatcgtcctccaaatgcacctcctgatggtgaaaagcca
ttatatcttcacatatctgccgctgcccagttgcagttaaaagagactacagaacgtatc
ttagcagttgatcgtgcagcagctatgattgaggagatgatgaaacagaaatcaatttca
cagatcggatcagttggtttacagacggtcaagatgctgagcacatgcgtatatttgggt
ttcgaagctgacccatcatctaatgttgctgctcgtattcgtgggcctaatgatcagtat
ataaatcacattatgaatgaaacaggagcaactgttgtattaagagggcgtggttcagga
agccttgagaatcaacatggagatgaagcacagctaccgctgcatctattattatccggc
agcaacccaaagagcatcgacgatgcaaaacgtttagctgagaatcttatggatacaatc
agtgtagaatttggggcttcaagggtttcctcaagcaaggtgtatggtgcagtaccacca
ccacagcaactgatttctggagctccgggttctgaccaggagaaccaaaatttgatttca
acgtatggtttgatgacatcgatacccatcacagcaccaccatacgctgttagttcgttt
ccagttactccagcaacaagtctttatcctcagtttccagtaatgcaatctctaggaata
tcaaatggtggcccctcgcagcccgtggctggaggaactagctatagtgggtatgctgga
atataccctcaagccacaccattgcaacaagttgctcaagtccttaagcaatcaatttct
cctgttatctctactgtgccccctactatgttgacagctacgtccttatcgatcccaagt
gataatgcaagtaatgaaatggaaaggcgtccaccccggaagcgaaagtttcaggaactt
ccagctgattgtaaggttccagaaaaagacaaacagcaatcggagttagcaatgacaggt
gatgttactccatcagcaaatagagtgcggtcgccgccttcaccaagatctgtaatgcct
cctcctccaccaaagaccatcgcaccaccgccttctaagaccatgtctcctccatcatca
aaaagcatgcttcctccaccaccacgttctaagaccatgtctcctctatcatcaaaaagc
atgcttcctccaccaccgcgatttacactgacaactcaacgttcaagattacaggacaac
cacatcagtgtaaagaaaccaaatccagttccagatacgttaataaagctgatggaatat
ggagacgatgaagacgatgatgacgatcctgatgagccattgacaactagatcgtga
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