Arabidopsis thaliana (thale cress): AT3G32940
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Entry
AT3G32940 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K13095
splicing factor 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G32940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G32940
Spliceosome [BR:
ath03041
]
Complex A
Other components
Complex A specific factors
AT3G32940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
823058
NCBI-ProteinID:
NP_189783
TAIR:
AT3G32940
UniProt:
Q0WVW4
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All DBs
Position
3:complement(13490828..13493834)
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AA seq
607 aa
AA seq
DB search
MTSTSAAKISMFGAKSGFVIPKNKLSGSLIPIFQRGNKTLGSADSDTGPPSKLGKKRKTK
WAPDLSQDIAVKKCRFLAYQKRVDQITQRLESGTLEVETNRTDLEFEKREAIGEILELNP
RYKAPPDYKPLLKEARLPIDVKEHSDFSFLSLIFGSQGDTQKRLEKETGAKVQIFGTKTG
GEKVELSPSDENEIQKSWQELYFQISSDTYEKVDAAIAVVELLMSSVSGNTGAGAAPPSS
ISEIISTIPGNSIATATAPTSERTTDHSQVLQHGSSFHLSSNQAPLHPPLEHFVSGLGYN
IQEQELPKNSMNLNPLFAQQLLPVPHDTSLPPGSHVPRPPDSFPFSLSNTPRTYSVTLPP
YSGSQIQPIGPRSTVRPSTLFTFHPVHRPTLLPDIDQSVRPLAPNFSPHPVAHQPGTEIP
SIPFPSASSLIAEYGSGSSLRPMSVSPHIASRPAGLVPAYPPTNTASRPFHGDFGYIPQQ
SNIITTPHISPRPNSQSAHLPHLPFQASQHFGQNFTRSQHFDRQMDQPLSHPSAPFHGNA
RSNVGPPLSQMMPRNFPGAQFPQHSAHFPPRPVFHHDNLIPRGQPQIRQRFNSGVHQVYD
PFSPSDG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacttccgctgcgaagatctcaatgtttggtgccaaatctggattcgttatc
cctaaaaacaaactatctggatcattgatcccaatttttcaacgtggaaacaaaacccta
ggaagtgccgattcagacactggacctccgtcgaagctggggaagaaaagaaagactaaa
tgggctcctgatttgtcacaagatattgcagtcaagaaatgtcgatttttagcttaccag
aaacgcgtggatcaaattacacagcgattggaatctggaactcttgaagtggagactaat
agaactgacctggagtttgaaaaacgcgaagcaattggggagatactcgagttgaatccg
aggtacaaggctccacctgattataagccattgctgaaagaagctagattgccgatcgat
gttaaagaacattctgatttcagctttctaagtctcatatttggttcccaaggtgatact
caaaagcggctcgaaaaagagactggagctaaagtacaaattttcggtactaaaacagga
ggagagaaggttgaactctctccttcggatgaaaatgagatccagaagtcatggcaagag
ttatattttcagatatcatctgacacttacgaaaaagtggatgcagctattgctgtagtt
gagctacttatgtcttcagtgtctggaaatacaggagctggtgctgctcctccatcttcc
atatctgaaattatttcaactattccaggcaacagcatcgcaactgctacagccccgacc
tctgaacggacaactgaccatagccaagtcctacagcatggttcctcatttcatttgtct
tcaaatcaagctccacttcatccacctcttgaacactttgtttcaggtcttggttataat
atccaggagcaagaactgcctaaaaattctatgaatctcaatcctctttttgctcagcaa
ctacttccagttcctcatgacacatcattacctcctggttctcacgtccctcgaccaccg
gattcgttcccttttagcctttccaacacaccaaggacctattctgtgactttgcctcca
tattctggcagtcagatacaaccaataggaccacgttctactgtgaggccgtcgacccta
tttactttccatcctgtacatagaccaacactgttaccagacatagaccaatcagtacgg
cctttggctcctaacttcagtccacatcctgtagctcatcagccaggtactgaaatacca
tcaattccttttccctcggctagcagtctaatagcagaatatggttctggtagttctctg
cgtcccatgtcagtgtcaccacatattgctagtaggcctgctggtcttgttccggcttat
cctcccacaaatactgcttctaggccgtttcacggggatttcggttacataccacaacaa
tcaaacattattaccacaccacatatatcccctagacccaactcacaatcagctcatctc
cctcatctgccatttcaagcctctcaacattttgggcaaaatttcacaagatcgcagcac
ttcgacaggcagatggatcaacccttgagccacccatctgcaccatttcatggtaacgcg
agatcaaacgtcggacctccattgtctcagatgatgcctagaaacttccctggagctcaa
ttcccgcagcattctgctcatttccctccaagaccagtgtttcatcatgataacctgata
ccgcgtggccagccacagattcgccaacggttcaactctggtgtccatcaagtatatgac
cctttttcacctagtgatggttaa
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