KEGG   Arabidopsis thaliana (thale cress): AT3G45000
Entry
AT3G45000         CDS       T00041                                 
Symbol
VPS24.2
Name
(RefSeq) SNF7 family protein
  KO
K12193  charged multivesicular body protein 3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT3G45000 (VPS24.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT3G45000 (VPS24.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT3G45000 (VPS24.2)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT3G45000 (VPS24.2)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT3G45000 (VPS24.2)
SSDB
Motif
Pfam: Snf7 PSD4 ARGLU NAD_binding_11 Semialdhyde_dh SapB_1 RNAseD_HRDC_C
Other DBs
NCBI-GeneID: 823635
NCBI-ProteinID: NP_190086
TAIR: AT3G45000
UniProt: Q9LXH5
LinkDB
Position
3:16460103..16461407
AA seq 200 aa
MTIKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSI
SMHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDA
VDNALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVE
GVDAEEELEAIRYRLANVRS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgactattaaaagtttgctttcagatattgagagagaagaaagaaatgtgcataaagct
atcaaagactcggtaaagcggaatgatttggtcactgctaaggcacttgctagggaaata
gtgagttctagaagaacggttaagcggctatacgagaataaagcgcaggtgaattctatt
tcaatgcatcttggggagagtattgctactgcggtaactgttgggaatctttcgaagagt
ggtgaggttatgaagcttgttaatagtctaatgaaagctccagagattgctgtgacaatg
caggcatttagcaaagagatgaccaagactggggttattgaagagtttgtgagtgatgct
gtggataatgccttagattctgaggatattgaagaggagatcgaggaagaggttgataag
gtattgactgccatagcaggagagactgcagctgagctcccggaagcagttaggaagcaa
aagatgaatgttccagctcaaaaggcggaaactttacacggggaagatgcaattgtagaa
ggagttgatgctgaagaagaactagaggccattagatatcggctagccaatgttagatca
tag

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