KEGG   Arabidopsis thaliana (thale cress): AT3G45577
Entry
AT3G45577         CDS       T00041                                 
Name
(RefSeq) tRNA-intron endonuclease
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT3G45577
Enzymes [BR:ath01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     AT3G45577
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    AT3G45577
SSDB
Motif
Pfam: tRNA_int_endo_N
Other DBs
NCBI-GeneID: 3769654
NCBI-ProteinID: NP_001030813
TAIR: AT3G45577
UniProt: Q2V3Q6
LinkDB
Position
3:16728701..16729547
AA seq 118 aa
MSSQTIILLCRERLISMAPRWKWALGFLSSCNVFLSEQAELLDRYCFGRLVFGAEKDKRW
IQLSYEEAFFLFYKLKCIKISLHGRSLVNGVDLWRSIRSFKPNFTILYKAYSHLRSKN
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagttcacaaacaattattctgttgtgtagagagagactcatctccatggcaccaagg
tggaaatgggctttaggtttcctctcaagttgtaacgtatttctatcagagcaagctgag
cttttggaccgttattgtttcggtagactagtttttggtgccgagaaagataagagatgg
attcagttatcttatgaagaagctttctttttgttctacaaactgaaatgcatcaagatc
tcccttcacggtcgttctctggtaaacggggtagatttatggcgatccataagatccttt
aagccaaattttacgatcttgtacaaagcttattcgcatctacgatcaaagaactag

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