Arabidopsis thaliana (thale cress): AT3G46510
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Entry
AT3G46510 CDS
T00041
Symbol
PUB13
Name
(RefSeq) plant U-box 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT3G46510 (PUB13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G46510 (PUB13)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G46510 (PUB13)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT3G46510 (PUB13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
MCAfunc
zf-RING_UBOX
KAP
zf-Nse
HEAT_EZ
MLKL_N
zf-C3HC4_4
Arm_2
zf-C3HC4
zf-C3HC4_2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
823804
NCBI-ProteinID:
NP_190235
TAIR:
AT3G46510
UniProt:
Q9SNC6
A0A654FE93
LinkDB
All DBs
Position
3:complement(17123731..17126897)
Genome browser
AA seq
660 aa
AA seq
DB search
MEEEKASAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISED
TLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEEL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNKSSDVDAYQPVLERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR
SNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKT
QQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWR
LAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLN
LSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPP
LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI
LAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG
LMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEAEPTHPESTTEAADT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaagcttctgctgcacagagcttaatcgatgtagttaacgagattgct
gcgatttctgattatcgtataacagtgaagaagctttgttataatctagcgaggagatta
aagctgcttgttcctatgtttgaggaaattagagaaagtaacgaaccgatcagcgaagat
acgttgaagactttgatgaatttgaaggaagctatgtgttcagcgaaggattatctcaaa
ttttgtagccaagggagcaagatttatctggtgatggagagggaacaagtgacaagtaaa
ttgatggaggtgtctgttaagttagaacaatctttaagccagattccatatgaagaactc
gatatatcggatgaagttagagaacaggttgagctggttcttagtcagtttcggcgagct
aaaggaagagtagatgtatcagatgatgagctatatgaagatcttcagtcgctttgcaac
aaaagtagtgatgtagatgcttatcagcctgtgctagagcgggttgcgaagaagttacat
ttgatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttca
agcggtggagatgttggtgaaaatattgaggagatggcaatggtattaaagatgattaag
gattttgtgcagacggaggatgataatggcgaggagcagaaagtaggagttaactctaga
agcaatggacagacttctacggcagcgagtcagaagatacctgtgattcctgatgatttt
cgctgtccgatttcgctggaaatgatgagagatccagttattgtttcatcagggcagaca
tacgaacgcacatgtattgagaaatggatagaaggtggacactcgacatgtccaaaaaca
cagcaggcgctaacaagcacaaccctcacaccaaactatgttctccgtagtctcatagct
cagtggtgcgaggccaacgatattgagcctccaaagcctccgagcagtttaagacccaga
aaagtatcgtccttctcatctcccgcagaagcgaacaagattgaagatcttatgtggaga
cttgcgtacggaaaccccgaggaccaacgatctgcagctggggaaatccgccttcttgca
aaacgaaatgcagacaaccgcgtggccatagccgaagctggagccatacctcttctcgta
ggtctcctctcaactcctgattctcgtattcaagaacattcggtaacagctcttctaaac
ctctccatatgtgagaacaacaaaggagccattgtttcagctggagctattcctggtata
gttcaagtgcttaagaaaggaagcatggaggccagagagaatgcggcggctacacttttc
agtctatcagtgatcgatgaaaataaagtgactatcggtgccttaggagcaattccgcca
ctcgttgtattacttaatgaaggtacacaaagaggcaagaaagatgctgctactgcactc
tttaacctctgtatataccaaggaaacaaaggaaaagctatacgtgcaggagtgattccc
acgttgactagactcttgacagagcccggaagcggaatggtcgatgaggcactcgcgatt
ttggcgattctctctagccaccccgaaggaaaagcaatcataggatcctctgatgcagtc
ccaagtttggttgagtttatcagaactggctcgcctagaaacagagaaaacgcagctgct
gttctagtccacctctgttctggagacccacaacatcttgtcgaagcgcagaaactcggc
cttatgggtccattgatagatttagctggaaatgggacggatagagggaaacgaaaagca
gcgcagttgcttgaacgcatcagccgtctcgctgaacagcagaaggaaacggctgtgtca
caaccggaagaagaagctgaaccaacacatccagaatccaccacagaagctgcagatact
taa
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integrated database retrieval system
