Arabidopsis thaliana (thale cress): AT3G46620
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Entry
AT3G46620 CDS
T00041
Symbol
RDUF1
Name
(RefSeq) zinc finger (C3HC4-type RING finger) family protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G46620 (RDUF1)
04121 Ubiquitin system [BR:
ath04121
]
AT3G46620 (RDUF1)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G46620 (RDUF1)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT3G46620 (RDUF1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT3G46620 (RDUF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING-like
Zf_IFT144_1st
zf-RING_16
zf-RING_10
FAR1_N
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
823815
NCBI-ProteinID:
NP_190246
TAIR:
AT3G46620
UniProt:
Q9SNB6
LinkDB
All DBs
Position
3:complement(17178601..17180559)
Genome browser
AA seq
395 aa
AA seq
DB search
MMPNSRSATITPTTESTTTTTTTTTTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGG
FIEEIEDSSNSTVAAIPASTPEVRSVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAG
ERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASG
NGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGD
CIVPWLSIRNSCPVCRFELPSDPIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGER
ILPVVLTEMDGGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRR
VRPSRGSSNSNVIDLDSDGETRVMNRSTSLIRRFF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaattctagatcggcgacaataactccgacgacagaatcaaccaccacaaca
acaacaacaacaacgactctaacgacgtcgtattggtgttacagttgtacacgattcatc
agcgtttgggaagatcaagacgcaaacgctggagtcttatgtccttattgcaacggtgga
ttcatcgaagagattgaagattcttctaattccaccgtcgcggcgattccggcttcgact
ccggaagttagatcggttgaggaaacacatagatctataattagacgtcgtagatctaat
cgccggacgtcctttaatccggtaatcgtcttacacggcggaggaggaggaggagccggt
gagagagttgagaacgaagaaggtgacggagctactagagaacgacgagcttatgagttt
tattacgatgatggatctggttcaggtctaagacctcttcctgattctgtatctgagatc
ttgatgggatctggattcgaacggttacttgaacaattgagtcagatcgaagcgtcaggt
aacggaatcggtagatctgggaatccaccggcgtcgaaatcagcgattgaatctttacct
agagtcgaaatctcagattgtcatacgaaagcagaagctaattgcgccgtgtgtacggag
gttttcgaagccggaatcgaaggtcgtgagatgccgtgtaaacacatatttcacggtgat
tgtattgttccatggctttcgattcggaattcgtgtcctgtgtgtagatttgagttacct
tcagatccaatccaacggagtaatgaagaagaacatgccgttgggatgacgatttggaga
ttacctggtggtggtttcgctgttggtaggtttaacgcgggagtgagagaaggtgagagg
atattgccggtggtattgacggagatggatggtggtggacttggtagtaatgaaggaccg
agaaggatatcttgggttagagctcatgagacaccggagatgagtaggaatggtggtcgt
tctggtaatggtggtagattgagaagagctgttcgtggaatggtttcgtttatgagaaga
gttagaccaagtcgtggctcttcgaattcgaatgttattgatttggatagtgatggtgaa
actagagttatgaatcgatcaacttcgttgatcagaagatttttctga
DBGET
integrated database retrieval system
