Arabidopsis thaliana (thale cress): AT3G47460
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Entry
AT3G47460 CDS
T00041
Symbol
ATSMC2
Name
(RefSeq) Structural maintenance of chromosomes (SMC) family protein
KO
K06674
structural maintenance of chromosome 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G47460 (ATSMC2)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
AT3G47460 (ATSMC2)
Condensin II
AT3G47460 (ATSMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
PspA_IM30
Tropomyosin
Gp58
Baculo_PEP_C
AAA_29
Taxilin
KIF9
DUF724
CC2-LZ
CENP-F_leu_zip
BST2
Fez1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
823900
NCBI-ProteinID:
NP_190330
TAIR:
AT3G47460
UniProt:
Q9SN90
LinkDB
All DBs
Position
3:17486490..17493395
Genome browser
AA seq
1171 aa
AA seq
DB search
MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA
NLQELVYKQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLINGK
LAQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPMEILSMLEEAAGTRMYENKKEA
ALKTLEKKQTKVDEINKLLEKDILPALEKLRREKSQYMQWANGNAELDRLKRFCVAFEYV
QAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVKALS
DKVDSLSNEVTRELSKLTNMEDTLQGEEKNAEKMVHNIEDLKKSVEERASALNKCDEGAA
ELKQKFQEFSTTLEECEREHQGILAGKSSGDEEKCLEDQLRDAKISVGTAETELKQLNTK
ISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKRAFDSLPYKEGQMEALEKDR
ESELEIGHRLKDKVHELSAQLANVQFTYRDPVKNFDRSKVKGVVAKLIKVNDRSSMTALE
VTAGGKLFNVIVDTEDTGKQLLQKGDLRRRVTIIPLNKIQSHLVPPRVQQATVGKGNAEL
ALSLVGYSEELKNAMEYVFGSTFVCKTTDAAKEVAFNREIRTPSVTLEGDVFQPSGLLTG
GSRKGGGDLLRQLHDLAEAETKFRAHQKSLSEIEANIKELQPLQTKFTDMKAQLELKMYD
MSLFLKRAEQNEHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDK
NREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLRT
QISTLASDVGNQRAKVDAIQKDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISD
MKLDRKKLENEVTRMEMEHKNCSVKVDKLVEKHTWITSEKRLFGNGGTDYDFESRDPHKA
REELERLQTDQSSLEKRVNKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEELDEK
KKETLKVTWVKVNQDFGSIFSTLLPGTMSKLEPPEGGTFLDGLEVRVAFGDVWKQSLSEL
SGGQRSLLALSLILALLLFKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSL
KEGMFSNADVLFRTKFVDGVSTVQRTVTKQS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaaggagatatgcttggaaggtttcaaatcatacgcaacgaggacagtagtt
ccgggttttgacccgcatttcaacgcgattacgggtctaaacggatccggaaaatccaac
atcctcgattccatctgcttcgttctaggtatcactaatcttcaacaagttcgagctgct
aatctacaggaactcgtttacaagcaaggacaagctggaatcactagagccactgtttca
gttaccttcgacaattccgagagaaatcgaagtcctttaggtcatgaagatcattcagag
attacagtaactagacaaattgtagttggtggaaagaacaagtatttgatcaatgggaag
cttgcacaaccaaatcaagttcagaatcttttccattcggtgcagcttaatgtgaacaat
cctcattttctgattatgcaagggcgtattaccaaagttttaaacatgaaacctatggag
attttatctatgcttgaagaagctgctggtacgagaatgtatgagaataagaaagaggct
gcgttaaagacgttggagaaaaagcaaactaaggttgatgagattaataagcttcttgag
aaagatatattgccagctttggagaagttgaggagagaaaagtcgcagtatatgcagtgg
gctaatggtaatgcggaattagatcggttaaagaggttttgtgtcgcttttgagtatgtg
caagcggagaagattagagataattcgatacatgttgttgaagaaatgaagataaaaatg
actggtattgatgagcagacagataagacacagggtgaaatatcggaactggagaaacag
attaaagctttgactcaagcaagggaagctagtatgggaggagaagtaaaagctttgtct
gacaaagttgattcattgtctaatgaagtgacacgtgaattatccaagcttactaatatg
gaggacacccttcaaggcgaagaaaagaatgctgaaaagatggttcataatatagaagat
ttgaagaaatctgtagaagaaagagcttctgctctcaacaagtgtgacgaaggagcagca
gaactaaaacaaaaattccaggaattttcaaccacattggaagagtgtgaaagagaacac
cagggtatactagctggtaagagtagtggagatgaagagaaatgtctcgaagatcaacta
cgtgatgcaaagatttctgttggaacagctgaaacggagttgaagcagctgaataccaaa
attagtcactgtgaaaaggaactaaaagagaaaaagtctcagttaatgtcaaaacaagac
gaagctgttgcagtggaaaatgaacttgatgctagaaaaaatgatgtagaaagtgtaaaa
agggcatttgattctcttccatataaagagggtcagatggaagcattggagaaggatcga
gaatcagaacttgaaattgggcacaggctgaaagataaagtgcacgaactttcggctcaa
ttagcaaatgttcagtttacataccgcgatcctgtgaaaaactttgatcgatcaaaggtg
aaaggtgtggttgcaaaactgataaaagtgaatgataggtcctcaatgacagctttggag
gttactgctggtgggaagttatttaatgttattgtagacacagaagatactggaaaacag
ctccttcaaaagggtgatcttcggagaagagttacaattattcctcttaacaaaattcag
tctcacctagttccacctagagtgcagcaagccactgttggaaagggtaatgcggaattg
gcactttctttagttggttatagtgaagaattaaagaatgccatggaatatgtttttggt
tccacttttgtttgcaaaactactgatgcggctaaggaagtagcatttaatagggaaatt
cggactcctagtgttacacttgaaggtgatgtatttcagccaagtggtcttcttactggt
ggaagtcgcaagggtggaggtgatctgctaagacaacttcatgatctggccgaggctgaa
acaaaatttcgagcacatcagaaaagtttgtctgaaattgaagcaaacatcaaggagctt
cagcctcttcaaacgaagttcacagacatgaaagcacagttggagctgaaaatgtatgac
atgtccttatttctaaaaagggctgaacagaacgagcaccacaagcttggtgacgcagtg
aagaaacttgaagaagaggttgaagaaatgagatcccaaatcaaagagaaggaaggtctt
tacaaaagttgtgctgatactgtctccacgctggagaaatccatcaaagatcatgataag
aacagagagggaagactcaaggacttggaaaagaatattaaaactctaaaagctcgtatt
caggcatcctcaaaagatctaaagggtcatgaaaacgtaagggagaggcttgtgatggag
caagaagcagtgacgcaggaacagtcatatttaaagagccagctaacttcattgaggacg
caaattagcactctggcttcagatgtgggcaatcaacgagccaaggtggatgccatacag
aaggatcatgatcagtctctctctgagctcaagttgatacatgcaaagatgaaggaatgt
gatacacagattagtggttctattgcagagcaggaaaagtgtctgcagaagattagtgac
atgaagcttgacagaaagaagttagaaaatgaggtgacaaggatggagatggagcacaag
aattgttcagtgaaggtagacaaacttgttgagaagcatacatggattacatctgagaag
cggctttttggaaacggagggacagactatgattttgaatcccgcgatcctcacaaagca
agagaagaacttgaaagactccagacagatcaatcaagtctagagaaaagagtgaacaag
aaggtcacggctatgtttgagaaagctgaagatgaatataatgctcttatgaccaagaaa
aatataatcgagactgacaaatcaaaaatcaagaaagttattgaggagcttgatgagaag
aaaaaagaaacactgaaagttacatgggttaaagttaaccaggattttggttccatcttt
tcaactctactacctggcaccatgtcaaaattagaacctccagagggaggtactttcctt
gatggtcttgaggtccgtgttgcttttggagatgtctggaaacagtctttatctgaacta
agtggagggcaaagatctcttcttgcactatctttaatcctggcgttgctactctttaag
ccagctcctatttatatcttagatgaggttgatgcagctcttgatctaagccacacacag
aacataggaagaatgataaaatctcatttcccacattcacagttcattgtggtttcactg
aaagaaggaatgttcagcaacgccgatgttctcttccgaacaaaattcgtggatggtgtt
tcaacggtccagaggacagtaacaaaacagagctaa
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