Arabidopsis thaliana (thale cress): AT3G48010
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Entry
AT3G48010 CDS
T00041
Symbol
CNGC16
Name
(RefSeq) cyclic nucleotide-gated channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
AT3G48010 (CNGC16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ath04040
]
AT3G48010 (CNGC16)
Ion channels [BR:
ath04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
AT3G48010 (CNGC16)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
823956
NCBI-ProteinID:
NP_190384
TAIR:
AT3G48010
UniProt:
Q9SU64
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All DBs
Position
3:complement(17721137..17724140)
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AA seq
705 aa
AA seq
DB search
MSNLHLYTSARFRNFPTTFSLRHHHNDPNNQRRRSIFSKLRDKTLDPGGDLITRWNHIFL
ITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFV
SKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQN
HTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYV
LSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLSNCDARNDD
DQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFIC
VAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKW
LTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTK
DTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNIN
HNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFI
QAAWRRYMKRKLAMELARQEEEDDYFYDDDGDYQFEEDMPESNNNNGDENSSNNQNLSAT
ILASKFAANTKRGVLGNQRGSTRIDPDHPTLKMPKMFKPEDPGFF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctccacctctacacctccgcacggtttcgcaatttcccgacaacattctcc
ctccgtcaccaccacaacgaccccaacaaccaacgccgtcgatccatcttctccaagctc
cgtgacaaaactctcgaccctggcggtgacctaatcacgagatggaaccacattttcctc
atcacatgcctcctcgctctcttcctcgatcctctctacttctatctccccattgtccaa
gccggaaccgcatgtatgtccatcgacgtccgtttcggcattttcgtcacatgcttccga
aacctagccgatctctccttcctcatccacattctcctcaaattcaaaaccgcttttgta
tccaaatcctctagagtctttggtcgtggagagcttgttatggaccgccgtgaaatcgct
atccgttacctcaaatctgagttcgtcatcgacctagccgccacccttcctcttcctcag
ataatgatttggtttgtgataccaaatgctggagaattcagatacgcagctcaccagaac
cacacactttcattgatcgtccttatacaatatgtgcctcgcttcctcgtcatgcttcct
ctcaaccgtcgaatcattaaagccaccggagtcgcagccaaaacagcctggtccggtgca
gcctacaatctcatcctttacttacttgtgagccacgttcttggatcggtttggtacgtt
ttatcgatccagagacagcacgaatgctggagaagagagtgcattaaagagatgaacgca
acgcattcaccttcttgtagtctcttgtttctagactgtggatcgttgcatgatccaggt
agacaagcttggatgcggatcactcgggttctgtcaaattgtgatgcacgcaatgacgat
gaccaacattttcagtttggtatgttcggtgatgcgttcactaatgatgtcacttcctct
cctttctttgataaatacttctactgcctttggtggggtctccgtaacctcagttcctat
ggacagagtcttgcagcgagtacactgagcagtgagactatattcagttgtttcatttgt
gtcgcgggtcttgttttcttctctcatctcattggaaatgttcagaactatctgcaatcg
acgactgctaggttagacgaatggagagttcgaagaagagacacagaggaatggatgcga
cataggcaattgccagatgagttacaagagcgtgtaaggcgattcgtccaatataaatgg
ctaacgactcgtggagtcgacgaagaagccattctacgggctctaccattggatcttcgt
cgccagatccaacgacatctctgtcttgccctcgttcgccgtgtgccgttctttgcgcag
atggatgaccagctcttggatgcgatatgtgagcgtctagttccgtccttgaacacaaaa
gacacctatgttatacgcgaaggcgatcctgtaaacgagatgcttttcattattagaggt
cagatggagagttcaactacagatggtggacggtcaggattctttaactctatcacactt
agaccaggagatttctgcggtgaagagcttttaacctgggctttagtgccaaacattaat
cataatctaccattgtccacgagaaccgtaaggactctctccgaagtagaagctttcgct
ctccgagcagaggacttgaaattcgtagctaaccaattcagacgtcttcacagcaagaaa
ctccaacatgctttcagatactattcgcatcaatggagagcatggggaacttgttttata
caagctgcttggaggcgatacatgaagaggaaattagcaatggagttagctaggcaagag
gaagaagacgattacttctatgacgatgatggagactatcaattcgaagaggacatgcct
gaaagtaataataacaacggagacgaaaacagcagcaataatcaaaatttgagtgcaaca
atattagcgtctaagttcgcagctaatactaagagaggtgttttagggaaccaaagagga
tctacaagaattgatcctgatcatccaactttgaagatgcctaaaatgtttaaaccagag
gatccaggattcttctga
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integrated database retrieval system
