Arabidopsis thaliana (thale cress): AT3G48110
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Entry
AT3G48110 CDS
T00041
Symbol
EDD1
Name
(RefSeq) glycine-tRNA ligase
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT3G48110 (EDD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT3G48110 (EDD1)
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
AT3G48110 (EDD1)
Transfer RNA biogenesis [BR:
ath03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT3G48110 (EDD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
823966
NCBI-ProteinID:
NP_190394
TAIR:
AT3G48110
UniProt:
Q8L785
LinkDB
All DBs
Position
3:17762970..17771146
Genome browser
AA seq
1067 aa
AA seq
DB search
MAILHFSLPLIVSFLRPHASPRFFLLPRSLSQSPFLSRRRFHRTSAVSSAAVHHQSYRNP
DDDVTRAVSVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPCTFLRVLGPEPWNV
AYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQQLFINSLSALGIDVTAHDIRF
VEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQE
VDHFKKILYADGITYGELFLENEKEMSSYYLEHASVDRLQKHFDYFDEEARSLLALGLPI
PAYDQLLKTSHAFNILDARGFIGVTERARYFGRMRSLARQCAQLWLATRESLGHPLGVAS
EPVPPVCHRAALEKVAEKVSEDPRSFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRL
RHGAVKAFGTPRRLVVLVDAMSSKQLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGV
PLEKLYRKVSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPI
RWVMALHGDLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEER
KKIILEKSNALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQ
KHQKYFSIIDESGQLLPYFIAVANGAINEDVVKKGNEAVLRARYEDAKFFYEVDTRKRFS
EFRDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVEDAASLAMSDLATA
VVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDAGMVLAIGDRLDS
LVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAASVQPTKVEANTV
EDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEKLSKGEMFPKIVE
AYSRPTRIVRGKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIHTGIEIEDFTEISMQL
VEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLSFLPGF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctccatttctctcttcctcttatcgtctctttccttcgtcctcacgcctct
cctcgcttcttcctcctccctcgctctctttctcagtcccctttcctctcccgccgccgt
tttcaccgtacctccgccgtttcctccgccgctgttcatcaccaatcctatcgtaatccc
gacgatgatgttacccgcgcggtgtctgttcctacattccaacaagcgattcaacgcctc
caggaatattgggcttccgttggatgtgccgttatgcaaccaagtaacactgaggtcgga
gctggcaccatgaatccttgtacctttttgagggttcttggtcctgaaccatggaatgtt
gcttatgttgagccaagcatacgtcctgacgactctcgctatggagagaatcccaatagg
cttcaaagacacactcaatttcaagtcatattgaaacctgaccctggaaactctcaacag
ctctttatcaacagtctttctgctctaggtattgatgtgactgcacacgatatacggttt
gtagaagacaactgggagagcccggtgcttggtgcttgggggttgggctgggagatttgg
atggatggtatggaaatcacacaatttacttacttccagcaggctggaagtcttccgttg
tctccagtatctgttgaaataacttatgggcttgagcgcatcatcatgttacttcaggaa
gttgaccatttcaaaaagatcttatatgctgatggaatcacctatggggagcttttcttg
gaaaatgagaaggaaatgagctcatattatttagagcatgctagtgtggatcgccttcaa
aagcatttcgattattttgatgaagaagcacgttccttgcttgccttaggacttccaatc
cctgcgtatgaccagcttctgaagacatctcacgcttttaacattttagacgctagaggt
ttcattggcgtaactgaacgtgctcgttatttcggtcgaatgcgtagcttggctcgccaa
tgtgcccaactgtggttagcgacacgtgagtctcttggacatcctcttggtgttgcctcc
gaaccagttcctcccgtttgtcacagagctgctctggaaaaagtggctgaaaaggtttct
gaagatccaagatcgtttattattgagatagggactgaagagatgccacctcaagatgtt
atcaatgctagtgaacaactcagggtcttagtgctagaattactagagaaccaaagattg
cggcatggtgctgtgaaagcatttggcacacctcgcaggctagtggttttagttgatgct
atgtcctcgaagcagctggaagaggaggttgaagttcgaggaccccctgcttctaaagct
tttgatgatgaaggaaatcctacaaaggctgctgagggttttagccgcagatatggcgtt
ccattggaaaaattgtacagaaaagtttctgggaagacagaatatgtacatgcacgagtt
acagagccagctcgacttgctttggaggttctgtcagaagatttacctggtatactggct
aaaatatcgttcccaaagtcaatgcggtggaactcttcagtaatgtttagcaggccgatt
cgctgggttatggccttacatggtgatctggttgtgccattctcctttgctggcatctca
agtggaaatgtatcttgtggacttcgcaatactgcttcagcatcactgttggtacagaat
gcagaatcctatgaagatactatgaggaattctggaatcaatattgagattgaggaaagg
aagaaaatcattcttgagaagtcaaatgcactagcaaagagtgtgagtgggcgccttgtt
gttccgcagaacttacttaatgaagttgcaaatctcgtcgaagctcctgtgcccttaatt
ggaaagttcaaggaatcattcttagaacttccagaggagctattaactattgttatgcag
aagcaccagaagtatttttccattattgatgagagtggacagctattgccttactttatt
gctgttgccaatggtgcaataaatgaggatgtggtgaagaaaggaaatgaagcagttctc
agggcacgttatgaagatgcaaagttcttctatgaggtggacacaaggaaaagattttct
gaattccgagatcagctacagggaattcttttccatgaaaagctggggacgatgctggat
aagatgaaccgcctcaaaaagatggtatctaaactttgtttggccctcaaaattgatgaa
gatctgcttccggttgtagaggatgctgcctcacttgctatgtcagatcttgcaactgct
gtagttacagaatttactgcgctgtcaggaataatggctcgtcattatgctctcagagat
ggctattcagagcagatagcagaagctttgctggaaattacacttcctagattttctgga
gacgtcatcccaaaaacagatgcaggaatggttttggcaataggtgatagattggatagc
cttgttggtttatttgctgctggttgccagccaagttcaacaaatgacccttttggcctt
agaagaatatcatatggcttagttcagattttggtcgagaaggataaaaatgtcaacttc
aaacgtgttctagaacttgcagccagtgtacaaccgacgaaggttgaggcaaacactgta
gaagatgtgtatcaatttgttactcgaagactggaacagctattggttgacaacggagta
agccctgaagtagttaggtctgtcctagcagagcgtggaaacaatccttgtctggcagca
cggactgcatacaagacggaaaagctaagcaaaggtgagatgtttccgaagatagtggaa
gcatattctcgtcccacacgcattgtccgtgggaaagatgttggtgttggagttgaggtg
gatgagaatgcatttgagactccccaagagagaacgttgtggagtacttacacctctatc
aaagatcgaattcacactggcattgaaatcgaggacttcaccgagatatccatgcaattg
gtggagccactcgaggatttcttcaacaatgtatttgtaatggtggaggaagaaagagtg
aggaagaacagactcgctctgcttaataacattgccaatcttcccaaaggagtcattgac
ctctcatttttgcccggattttga
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integrated database retrieval system
