KEGG   Arabidopsis thaliana (thale cress): AT3G49660
Entry
AT3G49660         CDS       T00041                                 
Symbol
WDR5a
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K14963  COMPASS component SWD3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    AT3G49660 (WDR5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G49660 (WDR5a)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     AT3G49660 (WDR5a)
    NSL complex
     AT3G49660 (WDR5a)
   HMT complexes
    COMPASS/SET1 complex
     AT3G49660 (WDR5a)
    COMPASS/SET1 complex (yeast)
     AT3G49660 (WDR5a)
    MLL-HCF complex
     AT3G49660 (WDR5a)
    MLL3/MLL4 complex
     AT3G49660 (WDR5a)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     AT3G49660 (WDR5a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 eIF2A Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st RMC1_N Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N PROPPIN Ge1_WD40 WDR54 VPS8_N DUF5888 WD_LRWD1 Beta-prop_NOL10_N Phage_stabilise
Other DBs
NCBI-GeneID: 824128
NCBI-ProteinID: NP_190535
TAIR: AT3G49660
UniProt: Q9M2Z2 A0A178VK59
LinkDB
Position
3:18413564..18415713
AA seq 317 aa
MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPI
AEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN
FNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR
IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHV
NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLI
ASGSLDKTVRIWTQKKE
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcagaggaaattccagcaacagcatcattcactccatacgtccattcacaaactcta
acatctcacaatcgcgccgtctcctccgtgaaattctcctccgatggacgtctcctcgca
tccgcctccgccgacaaaacaatccgcacttacacaatcaacaccattaacgatccaatc
gccgagcccgtacaagaattcaccggccatgaaaacggtatctccgatgttgcattctct
tcagacgcgaggtttatagtctcagcttccgatgacaaaaccttaaagctatgggacgtt
gaaactggttcattgatcaagacgcttattggacacactaattacgccttctgtgtcaat
ttcaatcctcaatcaaatatgattgtatctggttcgtttgatgaaactgttcggatctgg
gatgtcactactggaaagtgtttgaaagttcttcccgcgcattctgatcctgttactgct
gttgattttaatagagatgggtctctcattgtttcgagtagctatgatgggttgtgtcgt
atatgggattctgggactggtcattgtgtgaaaactctgattgatgatgagaatcctcct
gtttcgtttgttagattctctcctaatggcaagtttatcctcgttggtacacttgataac
acgctgaggttgtggaacatttcgtctgctaagttcctcaaaacatacactggccacgtg
aacgcacagtattgcatttcctctgcgttctccgtcacaaatggaaagcgaatagtcagt
ggatccgaggacaactgtgtacacatgtgggagctaaactccaagaaactgctacagaaa
cttgagggtcatactgagaccgtcatgaacgtagcatgccacccgacagagaacttgatc
gcatcaggctcgctcgacaagacagtaaggatttggacacagaagaaagaataa

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