Arabidopsis thaliana (thale cress): AT3G49990
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Entry
AT3G49990 CDS
T00041
Name
(RefSeq) Low temperature viability protein
KO
K14798
protein LTV1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G49990
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
AT3G49990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTV
Motif
Other DBs
NCBI-GeneID:
824161
NCBI-ProteinID:
NP_190568
TAIR:
AT3G49990
UniProt:
Q9SN19
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Position
3:complement(18532301..18534415)
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AA seq
502 aa
AA seq
DB search
MGKKKFIDKKKAATFELCPRDTSDPRYSDAPGGDKIFLRVDQNPVNINGFIEEDEEEEGD
SSRFDDAPEEMDYGYSSFGDSSSSLPAHVRKEILELGYPDDGYNYLEHLREIKNTGGGSN
FYVNPKYEVAQLPRDVKAYDASRVKISGMVNEEGNDNKLMYSVASKTVNVKVQKAIDPEV
AALLENSDGSEFGSDVEDLEEDFVVQANLTQKGESSGVSNGELEFSVRREVRERESDEPV
AENPRVPRQIDELFDQLELNEYGSDSDGDGYIAEDGEEEEEEDFMAQEVQNLIHGKAKDY
ELEEKYMNPADILKNSDSVRDKEEVDTAAHVIRRTVEYGENFDNGNEDEFVELTEESSDE
SEKHDCETIVSTYSNLDNLPGKILAAESARQKKLSETLANALSSNGRIINLQGRERIPVE
FLPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEEKKERKNAVKAEKREARIIKKQTKMLY
CGETQRAQRAVATSGPSSRPLK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagtttattgataagaaaaaggcggcgactttcgagttgtgtcctcgt
gatacgtcagacccaagatacagtgatgcaccaggtggtgataagatcttcttacgagtt
gatcaaaaccctgttaacatcaatggtttcattgaagaagatgaagaagaagaaggagac
agctcacggtttgatgatgctcctgaagagatggattatggttactctagttttggggat
tcgagtagttctttacctgctcatgtgaggaaggagattttagagttagggtatcctgat
gatggttataattacttggagcatttgagagagattaagaatactggtggtggttctaat
ttctatgtgaatcctaagtatgaggttgctcagttacctcgtgatgttaaggcttatgat
gcgtctcgtgtgaagatctctggtatggtgaatgaagaaggtaatgataataagttgatg
tatagtgttgcgtccaagactgttaacgtcaaggtgcagaaagctattgatcctgaagtt
gctgcgttgcttgaaaacagtgatgggtctgagtttggttctgatgttgaggatttggaa
gaagattttgttgttcaagctaatcttactcaaaagggtgaatcttctggtgtgagcaat
ggagagctcgagttttctgtaagacgtgaggttagagaaagagaaagtgatgaacctgtg
gctgaaaacccgagagttcctcgtcaaattgatgagctatttgatcagctcgaactcaat
gaatatggaagtgatagtgacggtgatggttacatagctgaagatggagaagaagaagaa
gaagaagacttcatggctcaagaagttcagaatcttattcatgggaaggcaaaagattat
gagcttgaagaaaaatatatgaaccctgcggatatactgaagaacagtgactctgtcaga
gataaagaggaagtggacactgctgctcatgttatccgccgaactgtagaatatggtgaa
aattttgataacgggaatgaagatgaatttgtagagctgactgaagaaagcagcgatgaa
agcgagaagcatgattgtgaaaccatagtctcaacatactcgaatctcgataacctccct
ggtaaaatccttgctgcagagtcagctaggcagaagaagctgagtgaaacattagctaac
gcattgagttcaaatggaagaatcattaatctccaagggagagagaggattcctgtcgag
tttttacctggtaggagagctgaacaaaccgatgtcaaagcggaaatcccaaaagctgaa
ccgatcaagaggaagactcatggtcaagagtcgaaagaagagaagaaagagcggaaaaat
gctgtaaaagccgaaaagcgagaagcaaggataattaagaaacagacaaagatgctgtat
tgcggtgaaacgcagcgtgctcaaagagctgttgctacctctggtccatcgtcgagacct
ctaaaataa
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