Arabidopsis thaliana (thale cress): AT3G50670
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Entry
AT3G50670 CDS
T00041
Symbol
U1-70K
Name
(RefSeq) U1 small nuclear ribonucleoprotein-70K
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G50670 (U1-70K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G50670 (U1-70K)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
AT3G50670 (U1-70K)
Complex B
AT3G50670 (U1-70K)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
824230
NCBI-ProteinID:
NP_190636
TAIR:
AT3G50670
UniProt:
Q42404
A0A178VDW4
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Position
3:complement(18826160..18829684)
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AA seq
427 aa
AA seq
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MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP
PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED
LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG
YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE
EIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHH
RDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEY
EHEGGGRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKMEEDDFRYEREYKRSKRS
ESREYVR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagactccggcgatcctttcttgcgtaatccaaacgccgctgttcaagctcgcgct
aaagttcagaacagagccaatgttcttcagcttaagctgatgggtcagagccaccctact
ggcttaacaaacaatctcttgaagctttttgagccacgtccgccattggagtacaaacca
ccaccagagaagagaaagtgcccgccttatacaggtatggctcagtttgtaagtaacttt
gctgagcctggggatccagaatacgctccacctaagccagaagttgaattaccttcgcag
aaaagggaaagaattcataaattgcgactggagaaaggtgttgaaaaggctgctgaggac
ttaaagaaatatgaccccaataatgatccaaatgctactggagatccatacaagacattg
ttcgtttcaagacttaactacgaatcctcagagagtaagattaaaagggagtttgaatct
tatggaccaattaaacgggttcatttggtgactgatcagctgaccaataaacccaaagga
tatgctttcattgagtacatgcacacccgtgacatgaaagctgcatataagcaagctgat
ggacaaaagattgacggcagaagagttttggttgatgtggagagaggtagaaccgtccca
aactggcgtccacgcaggcttggtggtggacttgggacctcaagagtgggtggtggtgaa
gaaattgttggggaacaacaaccgcaaggaagaacctcccagtcagaggagccatcgaga
ccacgggaagagcgtgagaaatctcgggaaaagggaaaagaaagggaaaggtctcgtgag
ctgtctcacgaacaacctcgagagaggtctcgtgacagaccgagagaggataagcaccac
agagaccgagaccaaggaggcagagacagggatagggacagcagacgtgatcgtgaccgg
acccgtgacagaggagacagagaccgccgtgaccgtgacaggggacgggatcgtacttca
agggatcatgaccgagaccgcagtagaaagaaggagcgggattatgaaggaggtgaatat
gagcatgagggtggtggtcggtcccgtgagagagatgcagagtaccgtggcgagccagaa
gaaactcgtggctactatgaagacgatcaaggggacacagaccggtacagtcatcgctac
gataaaatggaggaagatgacttcagatatgaacgtgagtacaagcggtctaagagatca
gaatcgcgagagtatgttcgttga
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