Arabidopsis thaliana (thale cress): AT3G50880
Help
Entry
AT3G50880 CDS
T00041
Name
(RefSeq) DNA glycosylase superfamily protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT3G50880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G50880
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT3G50880
DNA repair and recombination proteins [BR:
ath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT3G50880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
824252
NCBI-ProteinID:
NP_190657
TAIR:
AT3G50880
UniProt:
Q9SVL1
LinkDB
All DBs
Position
3:18913310..18915094
Genome browser
AA seq
273 aa
AA seq
DB search
MSLRKTLTAVNQSSLPPDSLISAGNLTVSEVSGSSSRIRFRPRKIRKVSSDPSPRIIITA
SPPLSTKSTVDIALRHLQSSDELLGALITTHNDPPLFDSSNTPFLSLARSILYQQLATKA
AKCIYDRFISLFNGGEAGVVPESVISLSAVDLRKIGVSGRKASYLHDLADKYNNGVLSDE
LILKMSDEELIDRLTLVKGIGVWTVHMFMIFSLHRPDVLPVGDLGVRKGVKDLYGLKNLP
GPLQMEQLCEKWRPYRSVGSWYMWRLIESRKTK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccgtaaaaccctaaccgccgtgaatcaatcttcgttaccgccggattcttta
atctccgccggtaatctcactgtttcagaggtctctggttcatcttctagaatcagattt
cgtcctcgtaaaatcaggaaagtttcgtcagatccgtcgccgaggatcattatcaccgcg
tctcctcctctatcaacaaaatcgactgttgatatcgctctacgtcacttacaaagctcc
gatgaacttctcggagcattaatcacaacgcacaacgatcctccactgttcgactcaagt
aatactccgtttctctccttagcgagatcaatcctataccaacaactcgcgacgaaagca
gcgaaatgtatctacgatcgattcatctctctattcaacggtggagaagcaggtgttgtt
cctgaatctgtgatctcactctccgccgttgatcttcgtaagatcggtgtctccgggaga
aaagctagttacctccacgatctagctgataaatacaacaacggtgtgctttctgatgaa
ttgattctgaaaatgagtgatgaagagttgattgataggttaactttggttaaaggaatt
ggagtgtggactgttcatatgtttatgatcttctcgttgcatagacctgatgtgttgcct
gtgggagatcttggtgtgaggaaaggtgtgaaagatctttatggtttgaaaaatcttcca
ggtccattgcaaatggagcagctttgtgagaaatggcgtccttataggtctgttggttca
tggtacatgtggagactaatcgagtctcgtaagaccaaatag
DBGET
integrated database retrieval system
