KEGG   Arabidopsis thaliana (thale cress): AT3G51310
Entry
AT3G51310         CDS       T00041                                 
Symbol
VPS35C
Name
(RefSeq) VPS35 homolog C
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT3G51310 (VPS35C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT3G51310 (VPS35C)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    AT3G51310 (VPS35C)
SSDB
Motif
Pfam: Vps35 SOP4
Other DBs
NCBI-GeneID: 824294
NCBI-ProteinID: NP_190699
TAIR: AT3G51310
UniProt: A8R7K9
LinkDB
Position
3:complement(19044331..19049454)
AA seq 790 aa
MIADDDEKWLAAAIAAVKQNAFYMQRAIDSNNLKDALKFSAQMLSELRTSKLSPHKYYEL
YMRVFNELGTLEIFFKEETGRGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTA
TDILKDLVEMCRAVQHPLRGLFLRSYLAQVTRDKLPSIGSDLEGDGDAHMNALEFVLQNF
TEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQLEGVDLGIYRDTVLPRIL
EQVVNCKDELAQCYLMDCIIQVFPDDFHLQTLDVLLGACPQLQPSVDIKTVLSGLMERLS
NYAASSVEALPNFLQVEAFSKLNYAIGKVVEAQADLPAAASVTLYLFLLKFTLHVYSDRL
DYVDQVLGSCVTQLSATGKLCDDKAAKQIVAFLSAPLEKYNNVVTILKLTNYPLVMEYLD
RETNKAMAIILVQSVFKNNTHIATADEVDALFELAKGLMKDFDGTIDDEIDEEDFQEEQN
LVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKRLPLTIPPLVFSALKLIRRLRGGDEN
PFGDDASATPKRILQLLSETVEVLSDVSAPDLALRLYLQCAQAANNCELETVAYEFFTKA
YLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRDTLTHKATGYSARLLRKPDQCRAV
YECAHLFWADECENLKDGERVVLCLKRAQRIADAVQQMANASRGTSSTGSVSLYVELLNK
YLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGAEPFINSTLRYIEFQRQQEDGGMNEK
YEKIKMEWFE
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatcgccgacgacgatgagaagtggcttgccgccgcaatcgccgccgttaagcaaaat
gctttctatatgcagcgcgctatcgactccaacaatctcaaagacgctctaaagttttct
gctcaaatgctcagcgagcttcgtacttccaagctttctcctcataaatactatgaactc
tatatgcgagtttttaatgaattggggactttggagatattcttcaaggaagagacggga
cgtggttgctccatcgcagagctctacgagttagttcagcatgccggtaacattttgcca
agattgtatcttttatgtaccataggatctgtatatatcaaatccaaggatgttactgct
acggatatacttaaggatcttgttgaaatgtgtcgagctgttcaacatcccttgcgtggt
cttttcttgagaagttatcttgctcaagttactagggataagttacccagcattggttct
gacttggaaggagatggtgatgcacacatgaatgctttagagttcgtgcttcaaaatttt
accgagatgaacaaattatgggttcgaatgcaacatcagggacctagtcgggagaaagaa
aaacgtgagaaagaaaggaatgaactacgtgatcttgttggtaagaaccttcatgtactg
agtcagttagaaggtgttgaccttggaatctacagagatactgttcttcctagaatactg
gagcaggttgtcaactgtaaggatgaacttgcacagtgctaccttatggattgcattatt
caagtctttcctgatgattttcaccttcaaactctcgatgtattattgggagcttgtcca
caacttcagccgtctgttgatatcaagacggttctttcgggtctaatggaaaggctttcg
aactatgctgcatccagtgtggaagcattgcctaatttcctgcaagtagaagccttttca
aagttaaattatgccattgggaaggttgtagaagcacaggcggacttgccggccgcagca
tctgtaacattgtatttgtttcttctaaaattcactctccatgtctattccgatcgtctg
gactatgtggaccaagttttgggatcatgtgttactcaactatctgccacaggaaagctt
tgtgatgacaaggcagcaaaacagatcgtcgcatttcttagcgctccattggaaaagtat
aataatgtagtaactatcttgaagcttaccaactatcctctagtaatggaataccttgac
cgtgagacaaacaaagcaatggcaatcattctagttcagagcgtttttaaaaataatact
cacattgctactgctgatgaggtcgatgcattgtttgaactggcaaagggtctcatgaag
gattttgacggaacaattgatgatgagattgatgaagaagatttccaggaagagcagaac
cttgttgcacggcttgttaacaagctctacattgatgatccagaagaaatgtctaagatt
attttcactgtaaggaagcacatcgtggctggaggacctaagcgtttgcctttaactata
ccaccccttgtcttttccgcgctcaagttaattcggcgactgcgaggtggagatgaaaac
ccatttggagatgatgcatcagcaacaccgaagagaattctacagctgttaagcgagacg
gtggaagttctatctgatgtttccgcacctgatttggcattgcgcctctacttgcagtgt
gctcaggcagcaaataactgtgagttagaaacagttgcttatgagttcttcacaaaggca
tatcttctgtatgaagaagaaatttcagattcaaaggcacaagtaacagcactacgttta
ataatagggacactccagaggatgcgtgtatttaatgttgagaacagagatactctgact
cacaaggcgacagggtattctgcaagactcctaaggaagccagatcagtgtagagctgtt
tatgaatgtgcgcatctcttctgggctgacgaatgcgagaacctgaaagatggagagagg
gttgtgctttgcctgaagagggcacaaaggattgcagatgctgttcaacaaatggccaac
gcatcccgtggtaccagtagcactgggtcggtgtctctatatgtcgaactgctgaacaag
tatctctacttcctggagaaaggaaaccaacaagtaacaggcgatacaatcaagagctta
gctgaattaatcaaaagcgagacaaagaaggttgagtcaggcgcagagccattcataaat
agtactctacgttacatcgagtttcagagacagcaagaagatggtggcatgaatgagaaa
tacgagaaaatcaaaatggaatggtttgaatga

DBGET integrated database retrieval system