Arabidopsis thaliana (thale cress): AT3G51310
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Entry
AT3G51310 CDS
T00041
Symbol
VPS35C
Name
(RefSeq) VPS35 homolog C
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT3G51310 (VPS35C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G51310 (VPS35C)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
AT3G51310 (VPS35C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SOP4
Motif
Other DBs
NCBI-GeneID:
824294
NCBI-ProteinID:
NP_190699
TAIR:
AT3G51310
UniProt:
A8R7K9
LinkDB
All DBs
Position
3:complement(19044331..19049454)
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AA seq
790 aa
AA seq
DB search
MIADDDEKWLAAAIAAVKQNAFYMQRAIDSNNLKDALKFSAQMLSELRTSKLSPHKYYEL
YMRVFNELGTLEIFFKEETGRGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTA
TDILKDLVEMCRAVQHPLRGLFLRSYLAQVTRDKLPSIGSDLEGDGDAHMNALEFVLQNF
TEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQLEGVDLGIYRDTVLPRIL
EQVVNCKDELAQCYLMDCIIQVFPDDFHLQTLDVLLGACPQLQPSVDIKTVLSGLMERLS
NYAASSVEALPNFLQVEAFSKLNYAIGKVVEAQADLPAAASVTLYLFLLKFTLHVYSDRL
DYVDQVLGSCVTQLSATGKLCDDKAAKQIVAFLSAPLEKYNNVVTILKLTNYPLVMEYLD
RETNKAMAIILVQSVFKNNTHIATADEVDALFELAKGLMKDFDGTIDDEIDEEDFQEEQN
LVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKRLPLTIPPLVFSALKLIRRLRGGDEN
PFGDDASATPKRILQLLSETVEVLSDVSAPDLALRLYLQCAQAANNCELETVAYEFFTKA
YLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRDTLTHKATGYSARLLRKPDQCRAV
YECAHLFWADECENLKDGERVVLCLKRAQRIADAVQQMANASRGTSSTGSVSLYVELLNK
YLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGAEPFINSTLRYIEFQRQQEDGGMNEK
YEKIKMEWFE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacgacgatgagaagtggcttgccgccgcaatcgccgccgttaagcaaaat
gctttctatatgcagcgcgctatcgactccaacaatctcaaagacgctctaaagttttct
gctcaaatgctcagcgagcttcgtacttccaagctttctcctcataaatactatgaactc
tatatgcgagtttttaatgaattggggactttggagatattcttcaaggaagagacggga
cgtggttgctccatcgcagagctctacgagttagttcagcatgccggtaacattttgcca
agattgtatcttttatgtaccataggatctgtatatatcaaatccaaggatgttactgct
acggatatacttaaggatcttgttgaaatgtgtcgagctgttcaacatcccttgcgtggt
cttttcttgagaagttatcttgctcaagttactagggataagttacccagcattggttct
gacttggaaggagatggtgatgcacacatgaatgctttagagttcgtgcttcaaaatttt
accgagatgaacaaattatgggttcgaatgcaacatcagggacctagtcgggagaaagaa
aaacgtgagaaagaaaggaatgaactacgtgatcttgttggtaagaaccttcatgtactg
agtcagttagaaggtgttgaccttggaatctacagagatactgttcttcctagaatactg
gagcaggttgtcaactgtaaggatgaacttgcacagtgctaccttatggattgcattatt
caagtctttcctgatgattttcaccttcaaactctcgatgtattattgggagcttgtcca
caacttcagccgtctgttgatatcaagacggttctttcgggtctaatggaaaggctttcg
aactatgctgcatccagtgtggaagcattgcctaatttcctgcaagtagaagccttttca
aagttaaattatgccattgggaaggttgtagaagcacaggcggacttgccggccgcagca
tctgtaacattgtatttgtttcttctaaaattcactctccatgtctattccgatcgtctg
gactatgtggaccaagttttgggatcatgtgttactcaactatctgccacaggaaagctt
tgtgatgacaaggcagcaaaacagatcgtcgcatttcttagcgctccattggaaaagtat
aataatgtagtaactatcttgaagcttaccaactatcctctagtaatggaataccttgac
cgtgagacaaacaaagcaatggcaatcattctagttcagagcgtttttaaaaataatact
cacattgctactgctgatgaggtcgatgcattgtttgaactggcaaagggtctcatgaag
gattttgacggaacaattgatgatgagattgatgaagaagatttccaggaagagcagaac
cttgttgcacggcttgttaacaagctctacattgatgatccagaagaaatgtctaagatt
attttcactgtaaggaagcacatcgtggctggaggacctaagcgtttgcctttaactata
ccaccccttgtcttttccgcgctcaagttaattcggcgactgcgaggtggagatgaaaac
ccatttggagatgatgcatcagcaacaccgaagagaattctacagctgttaagcgagacg
gtggaagttctatctgatgtttccgcacctgatttggcattgcgcctctacttgcagtgt
gctcaggcagcaaataactgtgagttagaaacagttgcttatgagttcttcacaaaggca
tatcttctgtatgaagaagaaatttcagattcaaaggcacaagtaacagcactacgttta
ataatagggacactccagaggatgcgtgtatttaatgttgagaacagagatactctgact
cacaaggcgacagggtattctgcaagactcctaaggaagccagatcagtgtagagctgtt
tatgaatgtgcgcatctcttctgggctgacgaatgcgagaacctgaaagatggagagagg
gttgtgctttgcctgaagagggcacaaaggattgcagatgctgttcaacaaatggccaac
gcatcccgtggtaccagtagcactgggtcggtgtctctatatgtcgaactgctgaacaag
tatctctacttcctggagaaaggaaaccaacaagtaacaggcgatacaatcaagagctta
gctgaattaatcaaaagcgagacaaagaaggttgagtcaggcgcagagccattcataaat
agtactctacgttacatcgagtttcagagacagcaagaagatggtggcatgaatgagaaa
tacgagaaaatcaaaatggaatggtttgaatga
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