Arabidopsis thaliana (thale cress): AT3G52090
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Entry
AT3G52090 CDS
T00041
Symbol
NRPB11
Name
(RefSeq) DNA-directed RNA polymerase, RBP11-like protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT3G52090 (NRPB11)
09124 Replication and repair
03420 Nucleotide excision repair
AT3G52090 (NRPB11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G52090 (NRPB11)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G52090 (NRPB11)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AT3G52090 (NRPB11)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AT3G52090 (NRPB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
824372
NCBI-ProteinID:
NP_190777
TAIR:
AT3G52090
UniProt:
Q38859
A0A178VE18
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(19317737..19319123)
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPERYERFVVPEGTKKVSYDRDTKIINAASFTVEREDHTIGNIVRMQLHRDENVLFAG
YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgaacgatatgagcgattcgtcgtccctgaaggcaccaagaaggtttct
tatgatagggatacgaagatcatcaatgctgcttccttcacggttgagagagaagaccat
acgattggaaacattgtccgcatgcaacttcatcgcgacgagaatgtcttgtttgctgga
taccaacttcctcatcctcttaagtacaaaatcatagtgaggattcacacaacaagccag
tcttccccaatgcaagcatacaaccaggccatcaatgacttggacaaggagctcgactac
ttgaagaaccagtttgaggcagaggtggccaagttttcgaatcagttttaa
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