Arabidopsis thaliana (thale cress): AT3G52120
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Entry
AT3G52120 CDS
T00041
Name
(RefSeq) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein
KO
K13096
splicing factor 4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G52120
Spliceosome [BR:
ath03041
]
Complex A
Other components
Complex A specific factors
AT3G52120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
Surp
G-patch_2
Motif
Other DBs
NCBI-GeneID:
824376
NCBI-ProteinID:
NP_566957
TAIR:
AT3G52120
UniProt:
Q94C11
A0A178VJW3
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All DBs
Position
3:19328490..19331970
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AA seq
443 aa
AA seq
DB search
MDKGAPPSIFVNDGSFMERFRQLQQEKDKDKDKVVQVEDSKPVKIISNPKPAANKISIGL
KPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKLEQRDTP
VKSAKVSDVAPPPPSDPTVKKVADKLASFVAKHGRPFEHITRQKNPGDTPFKFLFDENCA
DYKYYVFRLAEEEKLISQTKDSGVLHSGDAGSRTSTAAIPLQKPAYQQTGYQIPASALYD
TPVEPGASSRSAQASITRPSDSDSFSGPRGADPLSMMEFYMKKAAQEEKMRRPRQSKDEM
PPPASLQGPSETSSTDPGKRGHHMGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQA
DNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQY
KKRMMLGYKHRPNPLGNPRKAYY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaggagcacctcctagtatttttgtgaatgatgggtcattcatggaaagattc
agacagcttcaacaggagaaagataaagacaaggataaggttgtccaagttgaggattct
aagccggtgaagattatatcaaatcccaaacctgctgctaataaaatttccattggatta
aagcccaatgatgcccagaagaaaggtggtaagcttgctttcagcttgaagcaaaagtct
aagcttcttgcacctcctgtgaagcttggtacagaagaagatgaggatgatgaggatgtt
aaacatgaacaaggctttggatccgtaaagcgtcaaaagttagagcagagagacacacct
gtaaagtcagcaaaagtatcggatgttgcaccacctccgcccagtgatcctactgtgaag
aaagttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacatt
acacggcaaaagaatcctggggatacaccatttaaatttctttttgacgagaactgtgcg
gactacaagtactatgtattcaggctggctgaagaggaaaaattaatttcacaaaccaag
gattctggtgtacttcacagtggtgatgcaggctcgcgaacgtccacagcagcaatccct
ttgcaaaagccagcttatcaacaaacaggatatcagatccctgcctcagctctctatgat
actcctgtggaacctggagcttcttctagatctgctcaggcatcaattacaagacccagc
gacagtgactcctttagtgggccgaggggtgcagaccctctatcaatgatggagttttac
atgaagaaggctgcccaagaagagaaaatgagacgtcctaggcagtcaaaagacgaaatg
cctccaccagcttcccttcaaggcccatctgaaacttcctccacagaccctggaaagaga
ggtcatcacatgggtgattatatcccacttgaggagctagataagttcctttcaaagtgc
aatgacgcagctgcacaaaaagccacaaaggaggctgctgagaaagcgaagatccaagca
gataatgttggacataaactcttgtcaaaaatgggttggaaagaaggtgaaggtatagga
agctccagaaagggtatggcagaccctataatggcaggcgatgtaaagacaaacaacttg
ggagttggtgcttccgctccaggagaagtcaagcctgaggatgatatatacgagcagtac
aagaagcggatgatgctgggttacaaacacagacccaatccactgggaaatcccaggaag
gcgtattactaa
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