Arabidopsis thaliana (thale cress): AT3G53390
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Entry
AT3G53390 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K24741
WD repeat-containing protein 20
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ath04990
]
AT3G53390
Domain-containing proteins not elsewhere classified [BR:
ath04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
AT3G53390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Cytochrom_D1
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
824507
NCBI-ProteinID:
NP_190907
TAIR:
AT3G53390
UniProt:
F4JAE0
A0A654FFJ6
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All DBs
Position
3:19792466..19796807
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AA seq
558 aa
AA seq
DB search
MMNTSNGMISAPSSSSSPAANPQSPGIKTYFKTPEGKYKLHYEKTHSSGLLHYAHGKTVT
QVTIAQLKERAAPSTPTGTSSGYSASSGFRSATARLLGTGNGSRALSFVGGNGGGKSVST
SSRISGSFAASNSNTSMTNTNFDGKGTYLVFNVSDAIFICDLNSQEKDPVKSIHFSNSNP
MCHAFDPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVSKKLVGALHYNKDGSVNNSRCTSI
SWVPGGDGAFVVAHADGNLYVYEKNKDGATESTFPAIRDPTQFSVDKAKYSKSNPVARWH
ICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYI
LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQ
DTQLLLWDLEMDEIVVPLRRAPGGSPTYSTGSSAHWDNVIPMGTLQPAPCKRDVPKLSPI
IAHRVHTEPLSGLMFTQESVVTACREGHIKIWTRPSESETQTNSSEANPTTALLSTSFTK
DNKASLSSKIISGSTFKQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacttctaatggaatgatatcagcgccatcttcgtcgtcttcaccggcggcg
aatcctcagtcgccgggaattaagacttatttcaagacgcctgaagggaagtataagctt
cactacgagaaaacgcattcctctggtctccttcattacgcacatggcaaaactgttact
caggtaactatagctcagcttaaggaaagagctgctccttcgactccaactggtacttcg
tcgggttatagtgctagtagcgggtttcgttcagcaacagcgaggttgctaggaactgga
aatgggagccgtgcgcttagttttgttggaggtaatggtggcggtaaaagtgtgagtaca
agttcaagaattagtggctccttcgctgcttctaattctaatacttcgatgacaaatacg
aattttgatgggaaaggaacttacttggtcttcaatgtgagtgatgctatttttatctgt
gacttgaactcacaagaaaaggatccagtaaagtctatccatttcagtaattcaaaccct
atgtgtcatgcttttgatccggatgctaaggatgggcatgacttacttattgggctgaat
tctggggatgtgtacacagtatcactgagacagcagttacaggacgtctctaagaagcta
gttggtgctctgcattataacaaggacggttctgtgaataacagtcgttgcactagtatt
tcttgggtgcctggaggtgatggagcatttgtcgttgctcatgccgatggcaatttgtat
gtgtatgagaagaacaaagatggtgccactgaatcaacatttcctgctataagagatcct
acacaattttcagttgacaaggcaaaatatagcaagagtaatcctgttgcgagatggcat
atatgtcaaggttcaattaacagcattgcattctcaaatgatggggcacacttggcaact
gttggaagagatggctatcttcgcatttttgacttcttaacccagaagctagtatgtggt
ggaaaaagttattatggtgctctgctgtgctgttcttggagtatggatggaaagtacatt
ttgactggaggtgaagatgatttagttcaagtgtggagtatggaggatcggaaagttgtg
gcgtggggtgagggacataattcgtgggtaagtggagtagcgtttgattccaattggtcg
tcaccaaactcggatgggtcaggagagcatgtcatgtaccgttttggatcagttggtcag
gacacacagttacttctctgggaccttgagatggacgagatcgtagttccacttaggcga
gctccaggaggatctccaacttacagcacaggaagctcagctcactgggacaatgtcata
ccaatgggaactcttcaaccggctccttgcaaacgcgatgttccaaagctgtcaccgatc
atagcacaccgagttcacacagagcccctctctggcttgatgttcacacaagaatcagtc
gttacggcttgtcgagaaggccatataaagatctggacacggcccagtgaatcagaaacc
caaactaacagctcagaagcaaatcctacaactgccctcttgagcacaagcttcacgaaa
gacaacaaagcttcactgagcagcaagatcatcagtggctctactttcaagcaatga
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integrated database retrieval system
