Arabidopsis thaliana (thale cress): AT3G53920
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Entry
AT3G53920 CDS
T00041
Symbol
SIGC
Name
(RefSeq) RNApolymerase sigma-subunit C
KO
K03093
RNA polymerase sigma-I factor
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G53920 (SIGC)
Transcription machinery [BR:
ath03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT3G53920 (SIGC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GPW_gp25
Motif
Other DBs
NCBI-GeneID:
824559
NCBI-ProteinID:
NP_190960
TAIR:
AT3G53920
UniProt:
O24621
LinkDB
All DBs
Position
3:complement(19960789..19963980)
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AA seq
571 aa
AA seq
DB search
MASFNSFPIPKQIVGSSSSSSSSTSRPRILVRSSLTSSMTSTNSMLVFVHPHPLIKHWLS
LLRSDQTSFPIFVRIPMTSVVATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV
YVELKDPKENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGK
LGAAELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENG
DQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEE
ESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHED
LIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHI
QKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEF
TPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKV
SKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcaattcgttccccattcccaaacagattgttggttcttcttcttcgtcg
tcctcctctacttctcggccacgtattttagtgcgatcgagtttaacatcgtctatgacc
tctaccaatagtatgctggtctttgtacatcctcatcctttgattaaacattggctctcg
ttattgagatctgaccaaacttctttccccattttcgttagaattccaatgacttctgtg
gttgcaacgaggtggtcgtttctatcctcagtcaaagaggaaagcagaatttatcagaac
gattctctaaaagcatgtggctgcgcatctgtatctccttacactgcacaaaataatgtt
tatgttgagctcaaagacccaaaggaaaatattggcgtgggttctgcagaaagatcatat
tcatctcgtagcatgttgcaatacaatttactggcaaagaaccttttggcactagaggaa
acgtttgttgccttggattctgtaagaatggaaagagatattatgttgcaaatggggaag
ttgggggctgctgagttatttaaaacctgtctatctaggtatcgtggttcctcaatcacg
tcgtgcttatctgacacaactgagttggtggatactacgccgaatcaacaagtctttgta
tcctcgaggagaaaagtaaaaaagaaagcaaggaggtcgagtgtgacagctgagaatggt
gatcagagttctctgccaatcggtttaagaactacatggaacaatattgatgtccctaga
gtgagaagaccaccaaaatatagaaagaaaagagagaggatctctagaaacgagactgag
atgtcaacaggagtcaagatagtggcggacatggagagaatcagaacacaactggaggaa
gaaagtggtaaggtagcgagtttgagttgttgggctgcagcagctgggatgaacgagaaa
ctcctgatgcgcaatctacattacggttggtactgtagagatgaactggtgaaaagcacc
cggtctttggttctcttcctcgcaagaaattaccgtggactgggaatcgcccacgaagat
ttaattcaggcagggtatgtgggggtgttacaaggagcagagaggtttgatcacacaagg
ggttacaagttttcaacatatgtgcagtattggataagaaaatcaatgtctacgatggtg
tcacggcatgcaagaggcgtccatattccttcatcaataatccgaactatcaatcatata
caaaaggctcgtaagaccctgaaaacgagccatggtataaaatatgcggctgatgaggag
attgcaaaactaacaggccactcggtgaagaagattcgagcagctaaccaatgcctaaaa
gtggtcggttcaattgacaagaaagttggggattgctttactacaaaattcctggaattt
acaccagacacaacgatggagagtcctgaggaggccgtgatgaggcagagcgcgaggaga
gacatacatgatcttctagaagggttagagccaagagagaagcaagtgatggtcctacgt
tatggtcttcaagactacaggcccaagtccctggaagagattgggaagcttcttaaagtt
agcaaagaatggattcggaagatcgaacggagagcaatggctaaactcagagaccaaccc
aacgccgaagacctcagatattatttgaatcagtaa
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integrated database retrieval system
