Arabidopsis thaliana (thale cress): AT3G54860
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Entry
AT3G54860 CDS
T00041
Symbol
ATVPS33
Name
(RefSeq) Sec1/munc18-like (SM) proteins superfamily
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AT3G54860 (ATVPS33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G54860 (ATVPS33)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
AT3G54860 (ATVPS33)
Hops complex
AT3G54860 (ATVPS33)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
824651
NCBI-ProteinID:
NP_567009
TAIR:
AT3G54860
UniProt:
Q94KJ7
A0A654FIH7
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Position
3:complement(20324088..20330030)
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AA seq
592 aa
AA seq
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MAQIPSLENAPLNLKSIRDKSERELVNLLKDVRGTKCLVIDPKLSGSVSLIIPTSKLKEL
GLELRHLTAEPVQTECTKVVYLVRSQLSFMKFIASHIQNDIAKAIQRDYYVYFVPRRSVA
CEKILEQEKVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAIHE
LEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPM
CSQLTYEGLIDEILHISNGAVEVDSSVMGAQQEGKKMKVPLNSSDKLFKETRDLNFEVVV
QVLRQKAMTMKEDYTEINSTQTVSELKDFVKKLNSLPEMTRHIHLAQHLTTFTSKQSFNS
QLDMEQTLVEAENYDICYEYIEEMIHKQEPLTNVLRLLVLFSVTNSGLPKKQFDYIRMEL
LHSYGFEHVVTLNNLEKAGLLKKQEFKSNWLTVKRTLKLIVEDTDTSRPNDIAYVYSGYA
PLSIRLIQQAIHSGWRPMEDILKLLPGPHLETKRSGFPSSPSVDSLHGASNGVADGRRSI
VLVVFIGGVTFAEISALRYLASKEGMAYDLIVATTKIVNGATLIETFMEKLG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatccccagcttggagaatgctcctctcaatctgaaatccattagggacaag
tctgagagggagctcgtaaacttgcttaaagacgttcgtggaactaagtgtttggttatt
gatccaaagctcagtggttcagtctcattgatcatcccgacctctaagcttaaggaactt
ggtttggagttacgacatcttactgcggaaccagttcagactgaatgcacaaaagtggtt
tatcttgttcgctctcaacttagctttatgaaattcatagcgtctcacattcagaatgat
attgcaaaagcgattcagagagactactatgtttactttgttcctcgtaggtctgttgcg
tgtgagaagattcttgagcaagaaaaagtgcataacctggttacagtgaaagagtttccc
ttgtatatggttccactagatgaggatgttatttcatttgagctcgagctctctgaaaag
gattgccttgtggatggtgatgttagctccctttggcatatcgcaaaagccatacatgaa
cttgagttctcttttggagttatatcaaaaatgagggcaaagggcaaagcatcagttcgt
gttgcagacattctaaaccgcatgcaagtggaggaacctgtcaattcgaatgatgtggga
aggcctgaagtggatacactcattctattggatagagaggttgacatggttactcctatg
tgttcccagttaacttatgagggactaatagacgagattttgcatatcagcaatggagct
gtcgaggtcgactcatctgtgatgggtgctcagcaggagggaaaaaagatgaaagttccc
cttaattcaagtgataagttgttcaaggagacaagggatctcaactttgaagtcgttgta
caggttctacgtcagaaggcaatgaccatgaaggaggactacacggaaattaattctacc
cagacagtttctgagctgaaggactttgttaagaagcttaactcactaccagagatgaca
aggcacatacatcttgcccagcacctaacgacgttcacatccaagcaatcatttaattct
caacttgatatggaacaaacacttgttgaggcagaaaattatgacatatgctatgagtac
atagaagagatgatccataaacaggagcctctcactaatgtcttacgtctattagtctta
ttttctgttacaaactcagggttaccgaagaaacaatttgattatataagaatggaacta
ctccacagttatgggtttgagcatgtggttacactgaacaacttggaaaaagcaggattg
ttgaagaagcaggagtttaaaagcaactggctgacagtgaaacggacactgaaacttatt
gtcgaagacactgatacgtctaggcctaacgatatcgcttatgtctattcgggatatgct
cctcttagcattcgtcttatccaacaagctattcattctggatggcgtcctatggaagac
attttgaagctgttaccaggaccccatctggagactaaaagaagtggattcccaagtagt
ccatcagttgattcattgcacggagcttcaaatggggttgctgatggaagacgctcaatt
gttcttgttgtcttcattggaggtgtaacatttgctgaaatctctgctttacggtatctc
gcctctaaggaaggaatggcttatgatttgattgttgccacaacaaaaatcgtcaacggc
gcaacgttgatagaaacattcatggaaaaactaggctga
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