Arabidopsis thaliana (thale cress): AT3G55070
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Entry
AT3G55070 CDS
T00041
Name
(RefSeq) LisH/CRA/RING-U-box domains-containing protein
KO
K18624
macrophage erythroblast attacher
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G55070
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ath04812
]
AT3G55070
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
AT3G55070
Cytoskeleton proteins [BR:
ath04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
AT3G55070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
U-box
EDR2_C
Motif
Other DBs
NCBI-GeneID:
824673
NCBI-ProteinID:
NP_191067
TAIR:
AT3G55070
UniProt:
Q9M2V9
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All DBs
Position
3:20408274..20411364
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AA seq
418 aa
AA seq
DB search
MEIDSATNGNSDTVMTESAATITPSPVVVSSSRSNQFTESLKLEHQLLRVPFEHYKKTIR
TNHRSFEKEVSTIVNGVGELADSDWSKDDTVSRLTCLVTRLQGLKRKLEEGSNVENLQAQ
RCRARIDHLDSVDVENITEWNNTKLKRILVDYMLRMSYFETATKLSESSNIMDLVDIDIF
REAKKVIDALKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKA
IQYARKHLASWGTTHMKELQHVLATLAFKSTTECSKYKVLFELRQWDVLVDQFKQEFCKL
YGMTMEPLLNIYLQAGLSALKTPYGLEEGCTKEDPLSQENFRKLALPLPFSKQHHSKLVC
YISKELMDTENPPQVLPNGYVYSTKALKEMAEKNGGKITCPRTGLVCNYTELVKAYIS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgattccgccaccaacggaaactctgacaccgtcatgacggaatccgccgct
acgatcactccgtcgccggtcgtcgtctcgtcttcgagatcgaatcaatttacggaatct
ctcaagcttgagcaccagctcctccgcgttcctttcgagcattacaagaagacgatccgt
accaatcaccgttctttcgagaaagaggtctcaaccattgttaacggcgtcggagaattg
gctgattccgattggtctaaagacgataccgtttcgcgtcttacttgccttgttactcga
ttacaaggcctcaaacgaaagttggaagaagggagcaatgtggagaatttgcaagcccag
agatgtcgtgctcgcatcgatcatttggattcagtagatgtggaaaatattactgaatgg
aataataccaaactgaaacggattcttgtagactacatgctgcggatgtcatatttcgag
actgctacaaagctttcggaaagcagcaatattatggaccttgtcgacattgacatattt
cgagaagctaagaaggtgattgatgcccttaaaaatagggaggtagcttctgcattgaca
tggtgtgctgataacaaaacgcggttgaaaaagtcaaagagcaaatttgagttccaacta
aggctgcaagaattcatcgagttggtacgagttgatacagctgagagctacaaaaaagca
atccagtatgctcgaaagcatctggcatcatggggaacaacccatatgaaagaattgcag
catgttctggccactttggcttttaaaagtaccacagaatgctcaaaatataaggttttg
tttgaactacgacagtgggatgttttagttgatcagtttaaacaagaattttgcaagtta
tatggcatgacgatggaacccttattgaacatctacttacaggcaggcttgtctgcgctg
aaaactccatatggtttagaagaaggttgtaccaaagaggaccctctctcacaagagaac
tttcggaagctagctttgcctttaccgttctccaagcagcaccattcaaagcttgtttgc
tatatttctaaggagctaatggacacagagaacccaccacaggtgctgcccaatggctac
gtctacagcaccaaggctctcaaggaaatggcggaaaagaatggaggtaaaataacatgt
ccaaggacagggcttgtctgcaactacacggagttagttaaggcatatatatcatga
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