Arabidopsis thaliana (thale cress): AT3G55140
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Entry
AT3G55140 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G55140
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G55140
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
824680
NCBI-ProteinID:
NP_191074
TAIR:
AT3G55140
UniProt:
B3LF89
A0A654FGQ1
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All DBs
Position
3:20438627..20440452
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AA seq
331 aa
AA seq
DB search
MTSLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLW
IVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV
DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVE
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA
GVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWT
VEPPSETLKQIMQICTGWQSLSRPSDHGVPK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgctaccgtacgccgatgccgattgtagcctcagggctttagctggccgtgca
gagggattcggacgcttcgccgtcggtggtctccacggcgatctctatgtcgtcacttct
cttgcagatgatggacctgggactcttcgtgaaggaggtaggaggaaagagccgttatgg
attgtttttgcagtttctggaactataaatctcaattcatacttgagtgtatcgtcttac
aagacgattgatggacgaggacaacgaattaagctcacagggaaaggaataagattgaag
gaatgtgaacatatcatcatttgcaatttggagtttgaaggtggtagaggtcatgatgtt
gatggtattcagattaaaccaaagtctagacacatttggattgatcggtgtagtctccgc
gattacgatgatgggcttattgatattactagacaaagcacggatattactgtttctaga
tgttattttgcacagcatgacaagacgatgctgattggagcagatccttctcatgttgag
gatagatgtatccgagtgaccattcaccattgtttctttgatggaactaggcagagacaa
cctcgtctcagatttggaaaagttcatttgtacaacaactacacaagaaactggggaata
tatgctgtttgtgctagtgtagaagcgcaggtgttctctcaatgcaatatatacgaagca
ggagtgaagaagaaaacttttgaatactactcagaaaaggctgctgacaaggaagaagcg
agaactgggttagtacgatctgaaaatgacttgttcttgaatggagctcaaccttccttg
atgacaggagccagtgaagaatgtgtattccatccaagtgaacactacccaacatggact
gtggagccaccatcagaaactctcaagcaaatcatgcaaatttgtaccggttggcaatct
ttgtcccgtccttctgatcatggagttcctaagtaa
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