Arabidopsis thaliana (thale cress): AT3G56440
Help
Entry
AT3G56440 CDS
T00041
Symbol
ATG18D
Name
(RefSeq) autophagy 18 D-like protein
KO
K22991
WD repeat-containing protein 45
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G56440 (ATG18D)
Membrane trafficking [BR:
ath04131
]
Autophagy
Other autophagy associated proteins
Others
AT3G56440 (ATG18D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_2nd
Beta-prop_Vps41
WDR55
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
RMC1_N
Motif
Other DBs
NCBI-GeneID:
824811
NCBI-ProteinID:
NP_191203
TAIR:
AT3G56440
UniProt:
Q0WPK3
LinkDB
All DBs
Position
3:20926001..20928993
Genome browser
AA seq
391 aa
AA seq
DB search
MDPRRNFQPGGYDSRNTFTSGSFGPPDFGESDEAELVSVSWNQDYSCFAAGTSHGFRIYN
CEPFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQGRCISEFT
FRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENMANPRGLCCLSHHMNTSVLAC
PGIRRGEVRVEHFGLNMVQIINAHDSNIACMTLTLDGLLLATASTKGTLIRIFNTMDGTR
LQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVIGEDAYSTEHETSSNSL
QPLVSPASGANPGSSLSFLRGVLPKYFSSEWSFSQFHVPEVTQYFAAFGAQNTIAIIGLD
GSFYRCNFDPVNGGEMTQLEHFHFLKQDSPR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcggagaaacttccaaccaggtggctatgactctcggaataccttcacttca
ggatcttttgggcctccagattttggtgaaagtgatgaagcagagttggtttctgtttct
tggaatcaggattacagttgttttgctgctggcactagccatggttttcgtatatataac
tgtgaaccgttcaaggaaacttttaggcgagagctgaaggatggagggtttaaaattgta
gagatgcttttccggagtaatatcttggcgcttgttggtggtggacctaactcccagtac
ccttcaaataaagtattgatttgggatgatcatcaggggcgctgcatcagtgagtttact
tttcggtcggaaattcgtgcagtgaagttaagaagagatcgaattgttgttgttcttgag
cacaagatatatgtctacaattttatggatctaagacttcttcatcagattgaaaatatg
gcaaatccaaggggactatgttgcctctctcatcacatgaatacatctgtcttggcttgt
ccaggtattcgtcgaggagaggtccgagttgaacattttgggcttaacatggttcaaatc
attaatgctcatgattctaatatcgcgtgcatgaccttgacattggatggcttgctcctt
gcaactgccagtacaaagggaactctgattagaattttcaacacgatggacggaactcgt
ctgcaagaggtccgaagaggcgtggacagagcagatatctatagcattgctctatcacca
aacgtgcagtggcttgcagtatcaagcgacaaggggactgttcacattttctctctcaga
gtgagagttataggggaggacgcatactccactgaacatgagacttcttcaaattccctg
cagcctcttgtttctccagccagtggtgccaaccctggttcgtcattgtcttttctgaga
ggtgttctaccaaaatatttcagctcggaatggtcattttctcagttccatgtacctgaa
gtcacccaatactttgcagcatttggtgctcagaacacaattgcaattattggcttggac
ggaagtttctacaggtgcaatttcgatccagtgaacggaggagagatgactcagcttgaa
catttccattttctgaagcaagatagcccgagatag
DBGET
integrated database retrieval system
