Arabidopsis thaliana (thale cress): AT3G56580
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Entry
AT3G56580 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G56580
04121 Ubiquitin system [BR:
ath04121
]
AT3G56580
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G56580
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT3G56580
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT3G56580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
DUF1645
YHYH
CxC4
DpnI
DUF5427
zf-Nse
DZR_2
HypA
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
824825
NCBI-ProteinID:
NP_567039
TAIR:
AT3G56580
UniProt:
Q94AK4
A0A654FGX7
LinkDB
All DBs
Position
3:20961543..20963817
Genome browser
AA seq
320 aa
AA seq
DB search
MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAF
SAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNG
AAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLK
SSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQ
SSQNRSTNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEGHYHHHQQQQQQH
QHQHQQQQSHMGYSGWPFDY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtattcggaatactcattggtgtcacagatgtcaacgtgctgtttggcttcga
gctcgagatgctgtctgttcatattgtggaggagggtttgttgaggaaatcgatatagga
ccgagtagagctcacagggatgttgagcgtgatccaacctttgatctcatggaagctttc
tcagcctttatgagaagccgtttagctgaaagaagctatgaccgagaaatcagcggaaga
cttggctctgcgggttctgaaagcttttcaaacttggctcctctattgatctttggtggc
caagctccctttcgattggctggtggtgataatagttcagttgaagcctttgtcaatggc
gcagcacctggaattggtatcgcacgtggcaccaatgccggagactatttttttggaccc
ggtcttgaagaactgattgaacagctttcctcaggcactcatcaccgaggcccaccacca
gcaccgaaatcatcaattgatgcattgccaaccatcaagatcacacagaagcatctcaag
tcatcagactctcactgcccggtttgcaaagacgagttcgaactgaaatcagaagcaaaa
cagatgccgtgtcaccatatctatcattctgactgcattgtcccgtggctggttcagcat
aactcatgcccagtctgtcgtaaagagttgccatccagaggatcttcttcaagcacacag
agtagtcagaacagaagcaccaatggaagagaaaacagcagaagaaggaacattttctct
aacctctggccattccgctcgtctagctcaagctcgactcaaaaccgcagagacacaaac
aacacagcaactgcagaagaaggccactatcatcatcaccagcagcaacagcaacaacat
caacatcaacatcaacaacaacaatcccatatgggttacagtggatggccttttgactat
taa
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integrated database retrieval system
