Arabidopsis thaliana (thale cress): AT3G56860
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Entry
AT3G56860 CDS
T00041
Symbol
UBA2A
Name
(RefSeq) UBP1-associated protein 2A
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G56860 (UBA2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G56860 (UBA2A)
03041 Spliceosome [BR:
ath03041
]
AT3G56860 (UBA2A)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AT3G56860 (UBA2A)
mRNA cycle factors
Common to processing body (P body) and stress granule
AT3G56860 (UBA2A)
Spliceosome [BR:
ath03041
]
Common components
Common spliceosomal components
hnRNP proteins
AT3G56860 (UBA2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
824853
NCBI-ProteinID:
NP_001319772
TAIR:
AT3G56860
UniProt:
Q9LES2
A0A178VCS6
LinkDB
All DBs
Position
3:complement(21048727..21052320)
Genome browser
AA seq
478 aa
AA seq
DB search
MTKKRKLEGEESNEAEEPSQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVE
DDDDEDDGDENEDQTDGNRIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAE
KHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKS
KGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNS
EHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAK
RALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGH
LMAGNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPGN
GVGMPTGYGTQAMAPGTMPGYGTQPGLQGGYQTPQPGQGGTSRGQHGVGPYGTPYMGH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagagaaagctcgaaggagaagaatctaacgaagctgaagaaccgtcgcag
aagctgaagcagacgccggaggaggagcagcagcttgtaattaaaaatcaggataatcaa
ggagacgttgaagaagttgaatacgaggaagtagaggaagagcaagaagaagaagtagaa
gatgatgacgatgaagatgatggtgatgagaatgaggatcagacggatgggaatcgtata
gaggcggcggcgacgtctggatctggcaatcaagaagatgatgacgatgaaccaattcag
gatctgttggaaccattttcaaaggagcaagttttgagtcttcttaaggaagcagcggag
aagcatgttgatgtagccaatcgaattagggaagtagctgatgaggaccctgttcatcgg
aagatctttgtgcacggtcttggttgggatacgaaaacagagacgcttattgaagctttt
aagcagtacggagagatcgaagattgcaaggctgtgtttgataagatctcagggaaatct
aaaggttatggctttattctgtacaagtctcgttcaggtgctcgcaacgcactcaagcag
cctcagaagaagattggtagtcgtatgacggcatgccaattggcttctaaaggacctgtc
tttggtggagctcctatcgctgctgcagctgtttcagcgcctgctcagcattcgaactcg
gagcatactcagaaaaagatttatgttagtaatgtcggagcagagcttgatccacagaag
ttgctgatgtttttctcaaagtttggagaaattgaagaaggtcctttgggtcttgataag
tatactgggagacctaaaggtttctgtctctttgtttataagtcgtctgaaagcgccaag
agggctttggaggagccacacaagacttttgaaggccatatcttgcattgccagaaagct
atcgatggtcccaaaccgggcaagcagcagcagcatcaccataacccacacgcctataac
aatcctcgttaccaaaggaatgataacaatggttatggtccgcctggaggtcatggacat
ctcatggctggtaacccagctgggatgggtggtccaacggcacaggtgataaacccggcc
attggacaggccttgacagctttattggcatctcagggagctggtttggcttttaatccg
gcaattggacaggctttgttgggttccttggggacagctgctggtgtaaacccagggaat
ggagttggaatgccaactggttacggtactcaagctatggcaccggggacaatgcctggg
tacggtacacaacctgggttgcaaggcggttatcagactccgcaacctggtcaaggcggt
acaagtagagggcaacatggtgtcgggccatacggtactccttacatgggtcactaa
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