Arabidopsis thaliana (thale cress): AT3G57350
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Entry
AT3G57350 CDS
T00041
Name
(RefSeq) Nucleoporin interacting component (Nup93/Nic96-like) family protein
KO
K14309
nuclear pore complex protein Nup93
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT3G57350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G57350
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT3G57350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
824902
NCBI-ProteinID:
NP_191294
TAIR:
AT3G57350
UniProt:
F4J284
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All DBs
Position
3:complement(21220387..21225424)
Genome browser
AA seq
860 aa
AA seq
DB search
MANDQEMSGWTDLLHSSTKLLEQAAPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSQS
IAATRLLAREGINADQLSRDLKSFELKTTFEDVFPAETTSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNNYMLKVLEEDCIKEKRDFLHSLSKTSMLPKTKMINSSRGSHAGSLVPLSPQ
VSSKPGTELVSMTNKPIHEKKAYVYAEVVKKLNSARERGLPFKLATLFNGAYESLEIDLT
RGKSVNMQKLWQLIQGMTGEESAVQHGVSKRMALVIGARRHLECGHGKHIMDTIQSHPTQ
AALGGSVGNLQRIRAFLRIRLRDYGSLDFDSVDARRQPPVDTTWQQIYFCLRTGYYEEAR
EIAQSSRSSQQQFAPLLTEWITTGGTVAAQTAATASEECEKLLRMGDRFGQTTYDKKKLL
LYTIISGSRRQIDRIMRDFSTLFNTIEDFLWFKLSCVRDVAGGSSSMIVNDGLVPYSLDD
LQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAIMHMSNEAGDEGYNIDAVHVAISL
VDHSILSEGSGTGRKLSVMDANAEASSMIRQYGSMYLHHGDLQMTLEYYAQAAIAVGGGQ
QAWSGRSNVDQQRQRNLMLKQLLTEILSQEDGIHFLLGARGSGEEGELGRFLPDIKLRQQ
FLIEAAHQFQEAGLYDKSIELQKRVGAFSSALETINKCLSEAICSLVRGRPDGESRTEGL
VLSGNDILNSYKYHPDVSAQERHLVMEQETILRELEAILSIHKLARLNKHLDAIREVAKL
PFLHLDPRQPDTTSDEFQKASSYFQTCVPDLLKVALTCLDNVADTDGSIRGMRSKIAGFL
ASNTQRNWPRDLYEKIARSF
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaggagatgagtggatggactgatcttctccattcttcgactaagctt
ctggagcaagcggctccttcttctcagtttcctcctcttcagaggaatttggatcaattg
gaagcattgtcgaggaaactcaaagctaaaaccctaagaaacgaagctccttcacagtct
attgctgccactagactacttgcacgggagggaatcaatgcagatcaattatctcgtgat
cttaagtcatttgagttgaagacgacttttgaagatgtattccctgcggagacaacaagt
gttgaagaatacctgcaacaggttcatgaaatggcaatggtatcggctatacaggaggcc
cagaaagataatgttcgaagctttaacaactacatgttgaaagtgttggaggaggactgt
ataaaagaaaaacgtgactttcttcacagccttagcaaaacttcaatgttacctaagacc
aagatgatcaattcaagtagaggctctcatgctggttcactagtgcctttgagtccccaa
gtatcttcaaaacctggaacggaactcgtgtctatgactaacaaacccattcatgagaaa
aaggcatatgtctatgccgaggttgtgaaaaaactaaactctgcaagagaacgaggcttg
ccatttaaacttgcaacattgttcaacggtgcatatgaaagtctagaaattgatttgact
cgtggaaaatcagtcaacatgcaaaaattatggcagcttattcagggaatgacgggtgaa
gagtcagcagtacaacatggtgtttccaagaggatggccctcgtgataggtgcaagacgc
cacttggaatgtgggcatgggaaacatataatggatacaattcaaagtcatcctacacaa
gctgctcttggtggatcagttggaaatttgcaaagaattcgtgcttttcttcggattcgt
ctgagagattatgggagtttggactttgattcagttgatgctcgtaggcagcctccagtt
gatactacttggcagcagatatatttttgcttgagaactggttattatgaggaagctaga
gaaattgcccagtcatctcggtcatctcaacaacagtttgctcctctgcttacagagtgg
attacaacaggtggtactgtggctgcacaaaccgctgctactgcttctgaggaatgtgag
aaattgttaaggatgggtgatcggtttggccaaacaacatatgacaagaagaagcttcta
ctctacactatcatatctggttcccgaagacaaattgatcgcatcatgagagatttttcg
accctctttaacacaatagaagattttctctggttcaaactatcatgtgtacgtgacgta
gctggtggatcttcatctatgatcgtgaatgatgggctagtgccatacagtttggatgat
ctccaggcctatcttaataagtttgagccatcttactacactaagaatgggaaagaccct
ctggtatacccatatgttttgcttcttagcattcagttactaccggcgatcatgcacatg
tccaacgaagctggagatgaagggtataacattgatgctgtccatgtagctatatcgcta
gtggaccattccattctctctgaaggatctgggactgggcgcaaactaagtgtgatggat
gctaatgccgaggcatctagcatgattaggcaatatgggtcgatgtatttgcatcatggt
gatctgcaaatgacgctggaatactatgcacaagctgctattgcagtaggtgggggtcaa
caggcttggtctggaagaagtaatgttgatcaacaaaggcaaaggaacttgatgctgaag
caactactgactgagattttgtcacaagaggatggtattcactttctgcttggtgctaga
ggttccggtgaagaaggcgagcttggaagatttctgcctgatataaaattgaggcagcag
ttcttgatcgaagctgcgcatcaatttcaagaagctggattatatgacaaatcaatagaa
ctacagaagagagttggtgcgttttcgtctgccttggaaacgataaacaaatgtctatct
gaagccatttgctcccttgtccgtggaaggccagatggtgaaagccgaacagaggggctt
gttctctcgggcaatgacattctcaattcttacaaatatcaccctgatgtcagtgcccag
gaaagacatcttgttatggaacaagaaacaatactaagagagcttgaggcaatattatcg
atccacaagttggccagactaaacaaacatctagatgccataagagaagtcgcgaaactt
ccattccttcatctcgatccaagacaaccagacaccacctcggatgagttccagaaagca
tcttcttactttcagacttgtgtccctgatttacttaaggttgctctgacctgtttggat
aacgtagctgacactgatggatcaatcaggggcatgagatctaagattgctgggtttctt
gcaagcaacacacagcggaactggcctcgagatttgtacgagaagatagctcgaagcttt
tga
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