Arabidopsis thaliana (thale cress): AT3G58510
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Entry
AT3G58510 CDS
T00041
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G58510
03041 Spliceosome [BR:
ath03041
]
AT3G58510
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G58510
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G58510
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AT3G58510
mRNA cycle factors
Common to processing body (P body) and stress granule
AT3G58510
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AT3G58510
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT3G58510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
825020
NCBI-ProteinID:
NP_567067
TAIR:
AT3G58510
UniProt:
Q8LA13
A0A178VH17
LinkDB
All DBs
Position
3:21639978..21643795
Genome browser
AA seq
612 aa
AA seq
DB search
MSASWADVADSEKAVSQSKPPYVPPHLRNRPSEPVAAPLPQNDHAGYGGQPAGSRWAPPS
SGGGGASGGGYRNDGGRTGYGYGAGGGGGGGGGWNNRSGGWDRREREVNPFGDDAELEPV
FTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRH
AIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRE
LACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVS
MQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFM
SNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRG
ADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV
VNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTR
YASRASFGGGKKRSGGRFGGRDFRREGSYSRGGGGGGGGGGSDYYGGGGYGGGGYGGAPS
GGYGAGVTSAWD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcatgggcagatgtggctgattcagagaaggccgtttctcagtcaaagcct
ccttatgttcccccacacctacggaacaggccatcagagcctgttgctgctcctttgcca
caaaatgatcatgcagggtatggtggtcaaccagctgggtctcgttgggctcctcctagc
agtgggggtggtggtgccagcggcggtggctataggaatgatggagggcgcactggctat
ggttatggtgctggaggaggaggtggtggtggtggtggctggaacaacagaagtggaggg
tgggaccgtagggaacgtgaagtaaacccatttggagatgatgctgagttagaaccggtc
tttacagagcaggagaatactggcattaattttgatgcctatgaagatattccagttgag
accagtgggggagacgtgccccctcctgttaacacatttgctgacatagatcttggggat
gcattaaatctgaacatccggaggtgcaagtatgtgaggccaacaccggtacagcgtcat
gctattccaatactgcttgcagagagagatttgatggcctgtgcccagactgggtctggg
aagactgctgctttttgctttccaataattagtggaatcatgaaagatcagcatgtagaa
agaccccgtggttcacgggcggtttacccttttgcagtcatcctctcaccaacaagggaa
ttggcatgccagatacatgatgaagccaaaaaattctcctaccaaactggtgtgaaggtt
gttgttgcttatggaggaacacccattcaccagcagctcagggaactcgagaggggatgt
gatatccttgtggcaactcctggccggttaaatgatttgcttgaaagagctagagtctca
atgcagatgattaggtttttagctctagatgaggcagacaggatgctggacatgggtttt
gagccacagattagaaagattgttgagcagatggacatgcctccacgtggggtgagacag
acaatgctgttcagtgctacatttccaagtcagattcagagacttgcagctgatttcatg
tcaaactatatatttttggctgtgggaagagttggttcaagcactgatttaattacccaa
agggttgagtttgtccaagagtctgacaagagaagccatctcatggacctgcttcacgcg
caaagagagacccaagacaagcaatcattgacattagtttttgtggagacaaagagggga
gctgatactttggaaaattggctgtgcatgaatgagtttccagcaacctccattcatggc
gatagaacacaacaggaaagagaagtggcactgaggtccttcaaaactgggaggacacct
attttggttgcaacagacgtggcagcacgtggtcttgacattccccacgtggctcatgtt
gtaaacttcgatctaccaaatgacattgatgactatgtccaccgtatcggacgaacagga
cgtgcaggcaaatctggaatagcaactgccttcttcaacgagaacaatgcacaactggct
aggtcgcttgctgagctaatgcaagaagccaatcaagaggtccccgagtggctcacacga
tatgcttcacgtgcttcatttggtggtggtaagaaacggtctggtggtcggtttggtggc
cgtgacttcagaagggaaggctcttacagtagaggaggaggcggcggcggcggaggaggc
ggcagtgattactatggcggaggaggctatggtggtggtggatacggtggtgctccaagc
ggtgggtatggtgctggagtgaccagtgcttgggattag
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