Arabidopsis thaliana (thale cress): AT3G58570
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Entry
AT3G58570 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G58570
03041 Spliceosome [BR:
ath03041
]
AT3G58570
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G58570
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G58570
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AT3G58570
mRNA cycle factors
Common to processing body (P body) and stress granule
AT3G58570
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AT3G58570
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT3G58570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
825026
NCBI-ProteinID:
NP_191416
TAIR:
AT3G58570
UniProt:
Q9M2F9
A0A178V7W0
LinkDB
All DBs
Position
3:21656484..21660812
Genome browser
AA seq
646 aa
AA seq
DB search
MSSNSWADVSESERAPSGGGWGYSRPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYGG
ANSGYGGRGQGYGGRGSGYGGRGGPVGGWNARSGGWDRRDTETNPFGNDGNADPAVNEQE
NTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPIL
AAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQI
HDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVR
FLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIF
LAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADS
LENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNF
DLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYAS
RASFGGGKNRRSGGRFGGRDFRRESFSRGGGGADYYGGGGGYGGVPGGGYGAMPGGYGPV
PGGGYGNVPGGGYAPYGRGGGAYYGPGGYGTVPNQGYGPGVASAWD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaattcatgggctgatgtttctgaatcagagagggcaccatctggtggtggt
tggggttattctcgtccgtctcgaaccaactatgttcctccacatcttaggagccgtaca
ccatcttcggagtttgttgctccttcacctggtaataatgatcgtgggggatatggtggt
gcaaatagtggttatggtggtcgaggccaaggttatggtggtcgaggttcgggctatggt
ggtagaggaggtcctgtgggcggttggaatgccagaagtggaggttgggaccgtcgggat
actgaaactaacccgtttggtaatgatggaaatgcagacccggctgttaacgagcaggaa
aacactgtcattaactttgaggcctatgaagatattcccatcgagacaagtggggataat
gtgccacctcctgttaatacatttgcagagatagacctcggagaagctctcaatctaaat
atccagaggtgcaaatacgtgaagccgacccctgtgcagcgtaatgcaattcccatattg
gctgcaggaagggatttgatggcttgtgctcagacaggctctgggaagacagctgccttt
tgttttccgattattagtgggattatgaaggatcagcatatagagagaccacgtggagtt
cggggagtctatcctcttgctgtcattctctcaccaacaagggaattggcttgccagata
catgatgaagccagaaagttctcctatcaaactggagtgaaagttgtggttgcttacgga
ggaacaccagtcaaccaacagattagggagcttgaaagaggagttgatattcttgttgca
actcctgggagattaaatgatttgcttgagagaggtagagtctcattacagatggtaaga
ttcttggcacttgatgaggcggacagaatgctggacatgggttttgaaccacaaatcagg
aagatcgttcagcagatggacatgcctcctcctggtgtccggcagacaatgttgttcagt
gctacatttcctagggagatacagagacttgcatctgattttctttcaaattacatattt
ctggctgttggaagagtgggttcaagtacggatttaattgtccaaagagtagagtttgtt
catgattctgacaaaagaagccatctaatggaccttcttcatgcccagagggagaatggt
aaccaaggaaagcaagctttgactctagtttttgtggagacaaagaagggagctgactct
ttggagaattggttgtgcatcaatggtttcccagcaacgaccattcatggtgataggtca
caacaggaaagagaagtggcactgagatcattcaagactgggcggacacctattttggtt
gcaaccgatgtggcagcacgtggtcttgacattccgcacgtggctcatgtagtgaacttt
gatctaccaaacgacattgatgactatgtccaccgtatcggacgaacaggacgtgcagga
aattcaggactagcaactgctttcttcaatgacaacaacacaacaatggccaagccactg
gctgagctaatgcaagaagctaaccaggaggtccctgactggctgactcgatacgcatct
cgtgcttcatttggaggtggtaagaaccggcggtctggtggacggtttggtggtcgtgac
ttcaggagagaatcttttagtcgaggcggtggtggtgctgactactatggtggaggtggt
ggatatggaggcgttcctggtggtggctatggagcaatgcctggtgggtacggacccgta
ccaggtggtggatatggaaatgttccgggtggtggttatgcaccttatggtagaggtggt
ggtgcttactatggtcctggaggatatggaaccgttcctaaccaagggtatggtcctgga
gtggctagtgcgtgggactaa
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