Arabidopsis thaliana (thale cress): AT3G59850
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Entry
AT3G59850 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G59850
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
AT3G59850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
BCCT
Motif
Other DBs
NCBI-GeneID:
825155
NCBI-ProteinID:
NP_001326406
TAIR:
AT3G59850
UniProt:
A0A1I9LP65
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Position
3:complement(22109103..22111732)
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AA seq
432 aa
AA seq
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MLINKKQSISQIRKYYIYLTLNRFKSHTPITTFQLLPLSLTFKAMHSSLLIVLLFLLSVS
SSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSK
CKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGK
NCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIH
VQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNI
TVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQ
VSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGG
SEAGFQRPNSCL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaacaaaaaacaatccatttcacaaatacgcaaatactatatataccttaca
ctaaaccgtttcaaatcccacacacccatcaccacttttcaacttctccctctatctctc
actttcaaagcaatgcattcttcacttctcatagttctcctctttctcctctcggtctca
tcttcctcagctcaaacctacaatatcctctcttacggagccaaacccgacggcaaaacc
gactcgaccaaggcctttaccgtcctgtgggccaaagcatgtgcatcggtcaaaccggtc
accattttggtacctaagggacggtttttgttaagaagcattatttttgacggttccaag
tgtaaacgcaagtccgtcacgttccgtatccaaggtacacttgtggctccatcggattat
cgagtcatcggtaaagaaaactattggattttgttccagcatctcgacggcatctctgtc
tacggcggagttcttgacgcccagggagcttctctatggtcttgcaaaaagtccggcaag
aattgcccgagtggcgccacgagcatagggtttcagagctcacgcaacgtggtgatctcc
gggctgacgtcacttaacagtcagatgtttcacgtcgcgattaacggctgcagtaacgta
aagctcgacggagtcaaagtttctgcagacggaaacagtccaaacactgatgggatccac
gtgcagtcatcatctaccgtctccatcctcaactccaaaatctccaccggcgatgattgt
gtctccatcggtcccggcactaacggcctctggatcgagaatgtcgcttgtggccctggc
catgggatcagcattggaagcttgggaaaagaaagtgtggaggtaggtgtacaaaacata
acagtgaaaacggcgacgtttacaggaacagagaatggggtgagaataaagtcatgggcc
aggcccagtaatggatttgctaagaatatccgtttccagcattgtgttatgaacaacgta
caaaacccaatcgtcattgaccaaaactactgccctggcaacgaaaattgccctaatcag
gtttctgggataaaaatcagcgatgtaatgttcttcgatatacacgggacatcggcgacg
gaagttggagtgaaattagactgtagctctaagaagccgtgcacgggaattcgaattcaa
gatgtgaagttgacgtaccggaataaaccagcaacaacagattgtagtcacgctggaggt
agtgaggcaggatttcaacggcccaacagttgtctatga
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