KEGG   Arabidopsis thaliana (thale cress): AT3G61620
Entry
AT3G61620         CDS       T00041                                 
Symbol
RRP41
Name
(RefSeq) 3'-5'-exoribonuclease family protein
  KO
K11600  exosome complex component RRP41
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AT3G61620 (RRP41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT3G61620 (RRP41)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AT3G61620 (RRP41)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     AT3G61620 (RRP41)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 825335
NCBI-ProteinID: NP_191721
TAIR: AT3G61620
UniProt: Q9SP08 A0A178VJU4
LinkDB
Position
3:complement(22801215..22804104)
AA seq 241 aa
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ
QKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIF
LQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD
VTVGILPKLDKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQENTKQLEYRRA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtacgtaaaccctgaaggtcttcgattagatggtcgccgattcaacgagatgagg
caaatcgtagctgaagttggagttgtttctaaggctgacggttctgctgtcttcgagatg
ggtaataccaaagtaattgcagctgtttatggtccaagagagattcaaaacaagagccag
caaaagaagaacgaccatgcagtggtgttgtgtgagtatagtatggctcagtttagtact
ggtgatcgtagaagacagaaattcgacaggcgatcaacagagctatctcttgtcatccgt
cagacaatggaagcttgcatattaaccgaattgatgcctcactctcagatcgatattttc
cttcaggttctacaagctgatggaggaacaagatcagcttgtatcaatgccgcgactcta
gctctagcagatgctggaattccaatgcgtgatctcgctgtttcctgtagtgctggatat
ttaaacagtactcctcttcttgatctgaactatgttgaagacagtgctggaggagctgat
gtaaccgtcggtattctacctaaattagacaaagtgtcactccttcagatggatgccaag
ttaccgatggaaacatttgagacagtgtttgcattggcttctgaaggttgcaaggcaatt
gcagagagaatacgcgaggtacttcaagaaaacaccaaacagctagagtatcgccgagct
gcataa

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