Arabidopsis thaliana (thale cress): AT3G61790
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Entry
AT3G61790 CDS
T00041
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT3G61790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G61790
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G61790
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT3G61790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
825352
NCBI-ProteinID:
NP_567118
TAIR:
AT3G61790
UniProt:
Q84JL3
A0A178V9V8
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All DBs
Position
3:complement(22871697..22873833)
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AA seq
326 aa
AA seq
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MDLDSMDCTSTMDVTDDEEIHQDRHSYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHEL
LECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELP
CKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMH
SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET
EARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK
LRVTGRIWKEQQQSGEGGGACIPNLS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatagcatggactgtacatcaaccatggatgtgacagatgatgaagagatc
caccaagatcgccattcctacgcttctgtttccaagcatcatcatactaataacaacacc
accaacgttaatgctgctgcttctgggcttctccctaccaccaccagtgttcatgagctt
ctcgaatgtcctgtctgcaccaattctatgtaccctcccattcatcagtgtcacaatgga
catacgttgtgttcaacctgtaaagccagggttcacaaccgctgcccaacttgtagacaa
gagctcggtgatatccgttgtttggcactggaaaaagtagccgaatcacttgaactacct
tgtaaacacatgtcacttggatgtcctgaaatcttcccttattacagtaagctcaaacat
gagactgtatgtaacttcagaccttatagctgcccttatgctggatccgagtgttctgtt
acgggcgatatccctttcttagttgctcatctgagggatgatcataaggtggatatgcat
tctgggtgtactttcaaccatcgttatgtcaagtctaatcctcgtgaagtcgaaaacgcc
acatggatgttaactgtctttcactgcttcggtcaatacttctgtcttcactttgaggca
ttccagctcggaatggctccagtctacatggcgttcctgcgtttcatgggggacgagaca
gaagctcgaaactacaattacagtttagaagtgggaggttatggtcggaagctgatatgg
gaaggaacaccaagaagcgtaagagacagccacaggaaagttagagacagtcatgatgga
ctaattatacaaagaaacatggctctcttcttctcaggtggagataggaaagagctgaaa
cttcgagtcactggaaggatatggaaagagcaacaacaaagtggtgaaggtggaggagct
tgtatcccaaacttgtcttga
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