Arabidopsis thaliana (thale cress): AT3G62250
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Entry
AT3G62250 CDS
T00041
Symbol
UBQ5
Name
(RefSeq) ubiquitin 5
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03010
Ribosome
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AT3G62250 (UBQ5)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT3G62250 (UBQ5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ath03011
]
AT3G62250 (UBQ5)
04121 Ubiquitin system [BR:
ath04121
]
AT3G62250 (UBQ5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G62250 (UBQ5)
Ribosome [BR:
ath03011
]
Ribosomal proteins
Eukaryotes
Small subunit
AT3G62250 (UBQ5)
Archaea
AT3G62250 (UBQ5)
Ubiquitin system [BR:
ath04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
AT3G62250 (UBQ5)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT3G62250 (UBQ5)
Exosomal proteins of colorectal cancer cells
AT3G62250 (UBQ5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Ubiquitin_5
UBL_UBAC1
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
825398
NCBI-ProteinID:
NP_191784
TAIR:
AT3G62250
UniProt:
P59233
A0A178V9X1
LinkDB
All DBs
Position
3:23037018..23038009
Genome browser
AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGVEA
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacggggaagaccataacccttgaggttgaatcatcc
gacaccatcgacaatgtgaaggcgaagatccaagacaaggaaggaatcccaccggaccag
cagcgattgattttcgccgggaaacagcttgaagacggccgtaccctcgccgactacaac
atccagaaggaatcgacgcttcatctcgtcctccgtctccgtggtggtgctaagaagagg
aagaagaagacttacaccaagccgaagaagatcaagcacaagcataagaaggttaagctc
gctgttcttcagttttacaaaatcgatggatctggaaaggttcagcgtttgaggaaggag
tgccctaacgcaacctgtggagctgggactttcatggcgagtcattttgatcgccattac
tgtggtaagtgtggactcacctacgtttaccagaaagaaggagttgaagcttga
DBGET
integrated database retrieval system