KEGG   Arabidopsis thaliana (thale cress): AT3G62250
Entry
AT3G62250         CDS       T00041                                 
Symbol
UBQ5
Name
(RefSeq) ubiquitin 5
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03010  Ribosome
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    AT3G62250 (UBQ5)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT3G62250 (UBQ5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ath03011]
    AT3G62250 (UBQ5)
   04121 Ubiquitin system [BR:ath04121]
    AT3G62250 (UBQ5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT3G62250 (UBQ5)
Ribosome [BR:ath03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    AT3G62250 (UBQ5)
  Archaea
    AT3G62250 (UBQ5)
Ubiquitin system [BR:ath04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   AT3G62250 (UBQ5)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT3G62250 (UBQ5)
  Exosomal proteins of colorectal cancer cells
   AT3G62250 (UBQ5)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 825398
NCBI-ProteinID: NP_191784
TAIR: AT3G62250
UniProt: P59233 A0A178V9X1
LinkDB
Position
3:23037018..23038009
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGVEA
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagaccataacccttgaggttgaatcatcc
gacaccatcgacaatgtgaaggcgaagatccaagacaaggaaggaatcccaccggaccag
cagcgattgattttcgccgggaaacagcttgaagacggccgtaccctcgccgactacaac
atccagaaggaatcgacgcttcatctcgtcctccgtctccgtggtggtgctaagaagagg
aagaagaagacttacaccaagccgaagaagatcaagcacaagcataagaaggttaagctc
gctgttcttcagttttacaaaatcgatggatctggaaaggttcagcgtttgaggaaggag
tgccctaacgcaacctgtggagctgggactttcatggcgagtcattttgatcgccattac
tgtggtaagtgtggactcacctacgtttaccagaaagaaggagttgaagcttga

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