KEGG   Arabidopsis thaliana (thale cress): AT3G63460
Entry
AT3G63460         CDS       T00041                                 
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
  KO
K14005  protein transport protein SEC31
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT3G63460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT3G63460
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ath02044]
    AT3G63460
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    AT3G63460
Secretion system [BR:ath02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   AT3G63460
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 TPR_Sec16 TPR_GEMI5 Beta-prop_EIPR1 Beta-prop_EML MIOS_WD40 SRA1 EIF3I Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Prp18
Other DBs
NCBI-GeneID: 825521
NCBI-ProteinID: NP_851024
TAIR: AT3G63460
UniProt: Q8L611
LinkDB
Position
3:complement(23430623..23437374)
AA seq 1104 aa
MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE
IPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSV
HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDS
SPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVEENNFGTAPLKAPKWY
KRPVGASFGFGGKLVSCHARAPAKGTSSILSEVFLHSLVTEQSLVSRTSEFEAAIENGDM
TSLRGLCEKKSEETESEEEKETWGLLKIMFEEEGTSRTKLISHLGFTLPVAEKDQAVDGL
SSDLNGIRLEDTAADALDLDDSNEAAAFAMDNGEDFFNNFPAKPDTPVSTSAKDFMPSDT
DFSTKGEETQEMQEEEEESSDPVFDNAIQRALIVGDYKEAVDQCITANKMADALVIAHVG
GTALWESTREKYLKTSSAPYMKVVSAMVNNDLRSLIYTRSHKFWKETLALLCTFAQGEQW
TTLCDALASKLMAAGNTLAAVLCYICAGNVDRTVEIWSRSLANERDGRSYAELLQDLMEK
TLVLALATGNKKFSASLCKLFESYAEILASQGLLTTAMKYLKVLDSGGLSPELSILRDRI
SLSAEPETNTTASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHP
PMQQPTMFMPHQAQPAPQPSFTPAPTSNAQPSMRTTFVPSTPPALKNADQYQQPTMSSHS
FTGPSNNAYPVPPGPGQYAPSGPSQLGQYPNPKMPQVVAPAAGPIGFTPMATPGVAPRSV
QPASPPTQQAAAQAAPAPATPPPTVQTADTSNVPAHQKPVIATLTRLFNETSEALGGARA
NTTKKREIEDNSRKLGALFVKLNSGDISKNAADKLAQLCQALDNNDFSTALQIQVLLTTS
EWDECNFWLATLKRMMVKARQNVR
NT seq 3315 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtgggccgatccgcctccgttgccctggctcccgatgctcct
tacatggccgccggaaccatggccggagccgtcgatctctcctttagctcttccgccaat
ctcgagatctttaagctcgactttcagtctgacgatcgcgacttgcctctcgtcggggaa
atccccagctccgagcggttcaatagactcgcctggggaagaaacggatctggatccgag
gaattcgcccttggtcttattgccggcggccttgtcgacggaaatatagatctatggaat
cctctttctttgatcggttcccagcccagcgaaaatgcactcgttggccatctttcagtt
cacaaaggccctgttcgtggtcttgagtttaatgctatcagctcaaatctacttgcttct
ggggctgatgatggtgaaatttgcatttgggacttattaaagccttcagagccttctcat
tttccactgctcaagggtagtggttctgctacgcaaggtgaaatctcctttatatcgtgg
aatagaaaagttcaacagatattagcttctacctcatacaatgggactactgtaatttgg
gacttgaggaagcagaagcctataattaactttgcagattcagttcgacgccggtgctct
gttttacagtggaaccctaacgttactactcagataatggttgcatcagatgacgacagt
tcacctactttgaagctctgggacatgaggaatataatgtcacctgtgcgcgagtttact
ggacaccaaagaggggtaattgcaatggagtggtgcccaagtgacagctcatatcttctc
acctgtgctaaggacaaccgaacgatttgctgggatacaaatacagcagagattgtggct
gagttacctgctggcaacaattggaattttgatgttcattggtacccaaagatacctgga
gttatatcagcatcttcatttgatgggaaaattggcatctacaatatcgagggttgcagt
cgctatggtgttgaagagaataattttggtactgctcctttaaaagcaccaaaatggtat
aagcgcccggttggtgcatcttttggatttgggggaaagcttgtatcgtgtcacgcaagg
gcccctgcaaagggtacttcgagcattctatccgaggtttttttgcacagcctggtaaca
gaacagagtttggtgagtcgaacttctgaatttgaagctgcaatagaaaatggagatatg
acttctctaaggggtttgtgcgagaagaaatctgaagagactgaatccgaagaggagaaa
gagacatggggcttgctgaaaatcatgttcgaagaggaaggaacttcaaggacaaagttg
atcagccatcttggctttactttgcctgttgcggaaaaggatcaggcagtagatgggctc
tcatcagatctcaatggcattagattagaggatactgcggcagatgcactggatcttgac
gacagtaacgaggcagctgcatttgcgatggataatggagaagacttctttaacaacttt
cctgctaaaccggatacacctgtatctacatctgccaaagattttatgccttctgacaca
gatttttctaccaaaggagaagaaacgcaagaaatgcaagaagaagaggaagaaagttct
gacccagtttttgataatgccatccagcgagcgttgattgttggagattacaaggaggcg
gtggatcagtgtataactgcaaataagatggccgatgctttagttattgctcatgttggt
ggtacagcgttgtgggagagtactcgtgagaaatatttgaagacgagcagtgcgccatac
atgaaggttgtttctgcgatggtgaacaatgatctcaggagccttatctatacaaggtca
cataagttctggaaagagactcttgctctcctctgtacttttgcacaaggagaacaatgg
acaaccctgtgtgatgcccttgcctcgaagttgatggctgctggtaacactttggctgca
gttctctgctacatttgcgcaggcaatgttgacagaacagtagaaatttggtcgaggagc
cttgcaaatgagcgggatggaagatcttatgctgagcttcttcaagatcttatggagaag
actcttgtccttgctttggcaactggcaacaaaaagttcagcgcatctctgtgtaaactc
tttgagagttatgctgagatactggccagccaagggcttcttacaacggcaatgaagtac
ttgaaagttctggattctggtggcttgtcacctgaactttcaatattacgtgatcgtatt
tctctatctgcagaacctgagactaacactacagcttcaggaaacactcagcctcaaagc
accatgccatataatcaggagccaactcaggcgcaaccaaacgttcttgctaacccatat
gataatcagtatcagcaaccgtacactgattcttattatgtccctcaagtttcacatcca
cccatgcagcaaccaaccatgtttatgccacaccaagctcagccagctccgcagccatct
tttactccagctcctacaagcaatgctcagccatccatgagaactacatttgttccttca
actccccctgcactgaagaatgcagatcaatatcagcagccaaccatgagttctcattca
ttcacgggaccatctaacaatgcataccctgttcccccgggtcctggtcaatatgcacct
tctggcccttcacaacttgggcaatatcctaaccctaagatgccccaagttgttgctcca
gcagctggacccataggatttacgcccatggcaactccaggagttgctccaagatctgtg
caaccagcaagtcctccaacacagcaggcagctgcacaggcagcccctgcgcctgcaact
ccgccaccaactgttcagactgcagatacttccaacgttccagcccaccagaaacctgtg
atagcaacgttgacaaggcttttcaatgagacatcggaagcactgggaggcgcacgtgcg
aatactactaagaagcgtgagatagaagacaactcgagaaaattaggtgctctgtttgtg
aaactcaacagcggagacatctccaagaatgctgcggacaaactcgcacagctatgccaa
gctctggacaacaatgacttcagcacagcccttcaaatacaggtacttctgactaccagc
gaatgggacgaatgcaacttctggctggcaacactaaagcggatgatggtcaaggccagg
caaaatgtgcggtga

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