Arabidopsis thaliana (thale cress): AT4G00020
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Entry
AT4G00020 CDS
T00041
Symbol
BRCA2(IV)
Name
(RefSeq) BREAST CANCER 2 like 2A
KO
K08775
breast cancer 2 susceptibility protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT4G00020 (BRCA2(IV))
03460 Fanconi anemia pathway
AT4G00020 (BRCA2(IV))
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT4G00020 (BRCA2(IV))
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G00020 (BRCA2(IV))
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G00020 (BRCA2(IV))
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
AT4G00020 (BRCA2(IV))
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
AT4G00020 (BRCA2(IV))
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
AT4G00020 (BRCA2(IV))
FA (Fanconi anemia) pathway
Downstream FA components
AT4G00020 (BRCA2(IV))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
HpHbR
Motif
Other DBs
NCBI-GeneID:
828230
NCBI-ProteinID:
NP_191913
TAIR:
AT4G00020
UniProt:
Q7Y1C5
A0A654FKI2
LinkDB
All DBs
Position
4:complement(2895..10504)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSTWQLFPDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIARE
EAMPGEIPMFRTGLGKSVVLKESSIAKAKSILAEKVTYSDLRNTNCSIPQMRQVDTAETL
PMFRTASGKSVPLKESSIAKAMSILGSDKIIDSDNVLPRESGFGVSNSLFQTASNKKVNV
SSAGLARAKALLGLEEDDLNGFNHVNQSSSSSQQHGWSGLKTHEEFDATVVKHHSGTPGQ
YEDYVSGKRSEVLNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAG
GDQFFTPEKDERLSDIAINNGSANRGYIAHEEKTSNKHTPNSFVSPLWSSSKQFSSVNLE
NLASGGNLIKKFDAAVDETDCALNATHGLSNNRSLASDMAVNNSKVNGFIPRGRQPGRPA
DQPLVDITNRRDTAYAYNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPSKKHALQASSGL
SVVSCDTLTSKKVLSTRYPEKSPRVYIKDFFGMHPTATTRMDYVPDHVRRIKSSNADKYV
FCDESSSNKVGAETFLQMLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKCRGNF
LTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAINPKTDNDSQEAHC
SDSCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTSPLEA
VISSTICLLLNINGTYRAHWADRLGFCKEIGVPLALNCIKCNGGPVPKTLAGIKRIYPIL
YKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSEEGAK
IFKLLETAAEPEFLMAEMSPEQLRSFTTYKAKFEAAQQMRKEKSVAETLEDAGLGERNVT
PFMRIRLVGLTSLSYEGEHNPKEGIVTIWDPTERQRTELTEGKIYMMKGLVPINSDSEIL
YLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVGNAYT
DVLQKKQWVFVTDGSAQHSGEISNSLLAISFSTSFMDDSSVSHISHNLVGSVVGFCNLIK
RAKDVTNEIWVAEAAENSVYFINAEAAYSSHLKTSSAHIQTWAKLSSSKSVIHELRQRVL
SIIGACKSPSC
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcaattatttcccgattccagcggcgatggtttccggtgggaagtcgct
ggccggattcttcagtccgtctcggattctacgccaaccaaggcgctcgaatcgacagct
cctctaccttctatggccgatctcttgctccaaggatgctcgaagcttatagcacgggaa
gaagcgatgcctggggaaatcccaatgttcaggactgggctagggaagtctgtagttctt
aaagagtcttcgattgctaaagccaaatccattttagcagagaaggttacttactcagat
ttgcggaacacaaattgctcaattccccaaatgagacaagtggatacagctgaaactttg
ccaatgttcaggacggcctcggggaaatctgtccctttgaaagagtcttcaattgccaaa
gctatgtctattctaggaagtgataagattattgactcagacaacgttcttcccagggag
agtggatttggagtttccaacagtctttttcagacagcttccaacaaaaaggttaatgta
tcttctgccggtttagcaagggccaaggcattgttaggactagaagaagatgatttgaat
ggatttaaccatgtgaaccagtcgtcttcttcctcccagcaacatgggtggtccggatta
aaaactcatgaggagtttgatgctacagtagttaagcatcattcaggaactccaggacaa
tatgaggattatgtatctgggaagagatctgaagtcttaaatccatctttaaaggtgcct
ccaacaaagtttcagactgctggtggaaaatcattgtcagtgtcagctgaggcgttaaaa
cgtgccagaaaccttcttggtgaccctgaattagggtctttctttgatgatgtagctgga
ggtgatcaattttttacaccagagaaagatgaaaggttaagtgatattgctataaacaat
ggaagtgccaacagaggttatattgctcatgaagaaaagacaagcaacaaacatacgcca
aatagttttgtatctcctctttggtcatcttcaaagcaatttagttcagtcaacttggag
aacctagcttcagggggtaatttgatcaagaaatttgatgcggctgttgatgagaccgat
tgtgctctgaatgctacacatggactatcaaataacaggtctttggcatcagatatggca
gtgaataattccaaggtaaacggtttcattccaagaggtaggcaacctggaaggcctgct
gatcagccacttgttgatataacaaatcgcagagatacagcttatgcatacaataaacaa
gacagtacccaaaagaaaaggctgggaaagacagtctccgtttctcctttcaaaaggcca
aggatttcatcctttaaaactccttcaaagaaacatgctctgcaagcttcaagtggtttg
tctgttgtatcgtgtgatacacttacttccaaaaaggtgctttctacaaggtatccagaa
aagtctccaagagtatatatcaaggacttttttggaatgcatccaacagctacgaccagg
atggattatgtgccagaccatgtcagaagaatcaaatcaagtaatgcagataaatatgta
ttctgtgatgagtcttcttcaaacaaggttggagctgaaacttttcttcaaatgttggct
gagtctggtgcttccttacaacatgcatccagaaagtgggtcactaatcactataggtgg
atagtctggaaacttgcatgctacgacatatactacccagccaaatgcagaggaaacttt
ctgacaatcaccaatgttcttgaggaactaaaatacagatatgagagagaggtcaatcat
ggtcattgctctgcaatcaagaggattctgagtggtgatgctccagcttcttcaatgatg
gtgctctgcatatcagctattaatccaaagaccgataatgattctcaggaagcacattgt
tctgatagttgcagcaatgtgaaagtagaactcactgatgggtggtactcgatgaatgct
gctctggatgtcgtactaacaaagcagctgaatgctggcaaattgtttgtcgggcagaag
cttcgaatcctcggggcaggactttctggctgggctaccccaacatcaccacttgaggca
gtgatttcaagtacaatctgtttgttgttgaatattaatgggacatacagagctcactgg
gcggaccgactaggcttctgtaaagaaattggtgtccctctggctttaaattgtatcaag
tgcaatgggggtccagtgcctaaaacgctagctggcatcaaacgaatataccccatccta
tacaaggaaaggttaggtgaaaagaagtcaatagttcgatcagagagaatagaaagtaga
attatacagctgcataatcagaggcgctcagctcttgttgagggtattatgtgtgagtac
cagagaggaattaatggtgttcacagccagaacgacactgacagcgaagaaggagccaag
atctttaagctgttagagacggctgctgaacctgaatttcttatggcagaaatgagccca
gagcagttgagatctttcactacatataaagcaaaatttgaggcagcccagcaaatgcgg
aaggaaaaatcagtggcagaaactctggaagacgctggtttaggtgaaaggaacgtcacc
ccgttcatgaggattaggcttgttggcctgacgagcttaagttatgaaggagagcacaat
ccaaaagaaggcattgtaacaatctgggatcccacggagagacagagaaccgagctgaca
gaggggaaaatatacatgatgaaagggctagtaccaataaactcagattcagaaatactt
tacttacatgcgagagggtcaagctcaagatggcagcctttgtctcctaaagattctgaa
aattttcagccctttttcaaccctcgtaaaccaatctctttgtcaaatcttggtgaaatt
cctctttcaagtgaatttgatatcgctgcgtacgttgtatatgttggaaatgcatacacg
gatgttctacaaaagaagcagtgggtgtttgtgacagatggatccgcacaacattcaggg
gaaatctcaaacagtcttcttgctataagcttcagcacctcattcatggatgatagctct
gtttcccacatcagccataatttggttggatccgtggtcggattttgcaatctaattaaa
agagcaaaggatgtgacaaacgaaatttgggttgctgaggcagcagagaactcagtctac
ttcataaacgcagaagctgcctactcttctcacctcaaaaccagcagtgcccatatccaa
acatgggctaagctctcttcttccaaatccgtcattcatgaacttcggcaaagagtctta
tctataatcggtgcttgtaaatcaccttcatgctga
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integrated database retrieval system
