Arabidopsis thaliana (thale cress): AT4G00290
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Entry
AT4G00290 CDS
T00041
Name
(RefSeq) Mechanosensitive ion channel protein
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ath02000
]
AT4G00290
Transporters [BR:
ath02000
]
Other transporters
Pores ion channels [TC:
1
]
AT4G00290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
Motif
Other DBs
NCBI-GeneID:
828077
NCBI-ProteinID:
NP_567165
TAIR:
AT4G00290
UniProt:
Q8VZL4
Structure
PDB
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All DBs
Position
4:complement(122851..125591)
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AA seq
497 aa
AA seq
DB search
MAGVRLSLLKSIQRSIKPHATAKSCSGLLNSHARAFTCGNLLDGPKASPSMISFSSNIRL
HNDAKPFNYLGHSSYARAFSSKSDDFGSIVASGVTGSGDGNGNGNDWVEKAKDVLQTSVD
AVTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTLFAWVVMPRILRRFHT
YAMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFS
PTVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDKVSSVGLFAIGLMASA
EACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFSMGDTIKAGSVEGQVI
EMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASKIPLQIDDLDMIPQISNE
IKEMLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGKEELYNTQQEVLLEAVKI
IKKHGVSLGTTWDNSTL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccggagttaggttatcgcttctcaagtcaattcaaagatcaataaaacctcatgcc
actgcaaaatcgtgttctggtctcctaaactctcatgccagggcctttacttgcggaaac
cttcttgatggaccaaaagcttctccttcgatgatctccttttcatcgaacatacgcctg
cataatgatgctaagcctttcaattacttaggccattcttcgtacgcacgagctttcagc
tccaaatctgatgatttcggaagtattgtagcctctggtgttactggctctggtgatggg
aatgggaatgggaatgattgggttgagaaagctaaagatgtgttgcagactagtgtcgat
gctgttactgagactgcaaagaagactaaagatgtctctgatgagatgatccctcatgtt
cagcagttccttgactctaacccttatcttaaagatgttatagttcctgttagtctcact
atgactggtactttatttgcttgggttgtgatgcctaggattcttagaaggtttcacact
tatgctatgcaaagttccgctaaactgcttcccgttggcttctctaacgaagatgttcct
tatgagaaaagcttttggggagctttagaggatcctgctcgttacttggtgaccttcatt
gcttttgcacaaattgctgcaatggtggcgccaacaactatagcagctcaatacttttcc
ccgactgtgaagggagcggttattctctcacttgtgtggttcctatatcggtggaagacc
aatgtgattacccgaatgttgtcggctaagagttttggtgggcttgatagggagaaggta
ttgactttagacaaagtatcatctgttggtcttttcgctatcggtttgatggcttctgct
gaagcatgtggtgtagctgttcaatctatcttgacagttggtggagttggaggggtagcc
accgcatttgctgccagagatatccttggtaatgtgctgagtggtctgtcaatgcaattc
tcgcggcctttctctatgggtgatactatcaaagctggatccgtagaaggtcaagttatt
gaaatgggacttacgacaacatctttgttgaatgcagaaaaatttccggttttggtaccc
aattcactgttttcgagtcaggtgattgtgaataagtcacgtgctcagtggcgagcaata
gcatccaagatcccactgcagatcgatgacttggatatgattcctcaaatatcaaatgaa
atcaaggaaatgttgaggtccaacacaaaagttttcttaggaaaagaagctccacactgt
tacttatcgcgagtggaaaaatctttcgctgaacttaccattgggtgcaatctgatacgc
atgggaaaagaagagctatacaatacacaacaagaggtccttcttgaggcggtgaagatc
ataaagaagcacggtgtgtcgttaggtaccacctgggacaattctacattgtga
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