Arabidopsis thaliana (thale cress): AT4G00660
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Entry
AT4G00660 CDS
T00041
Symbol
RH8
Name
(RefSeq) RNAhelicase-like 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT4G00660 (RH8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G00660 (RH8)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G00660 (RH8)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT4G00660 (RH8)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
AT4G00660 (RH8)
mRNA degradation factors
5'-3' decay
Decapping complex
AT4G00660 (RH8)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
piRNA pathway
AT4G00660 (RH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
828042
NCBI-ProteinID:
NP_191975
TAIR:
AT4G00660
UniProt:
Q8RXK6
A0A178UXT2
LinkDB
All DBs
Position
4:274252..278737
Genome browser
AA seq
505 aa
AA seq
DB search
MNNRGRYPPGIGAGRGAFNPNPNYQSRSGYQQHPPPQYVQRGNYAQNHQQQFQQAPSQPH
QYQQQQQQQQQWLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRY
RTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTG
KTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK
DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISF
LPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLN
TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
YRIEQELGTEIKQIPPHIDQAIYCQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcgaggaaggtaccctcctggaattggcgctggccgtggagcctttaaccct
aaccctaattaccaatcacggtcgggttatcaacaacatccgccgccccaatacgttcaa
cgcggtaattacgctcagaatcaccaacaacagtttcaacaagcgccgtctcagccgcat
caataccaacagcaacagcagcaacaacaacaatggcttcgaagaggtcagatccccggc
ggtaacagtaacggtgacgctgttgtagaagttgagaaaactgttcaatccgaagttatc
gacccaaactcggaagattggaaagcaaggctaaaactacctgcacctgatactcgatac
agaacagaggatgtgacagccaccaaagggaacgagtttgaagattactttttgaaacgg
gagcttctcatgggaatatatgagaagggttttgaaagaccttctcctattcaggaagag
agtattccaattgccttaactggtagagatatccttgccagagcaaagaacgggactgga
aagaccgccgccttttgtattcctgtcttggaaaaaattgaccaagataacaacgttatt
caagctgttataattgttccgactcgagagttagcccttcagacatcacaggtctgtaaa
gagctgggtaagcatttgaagattcaagtcatggtgaccactggtggcaccagtctgaaa
gacgatatcatgcgtttgtatcagcctgttcatttactggtaggaactcctgggagaatt
ctggatcttaccaagaaaggtgtttgtgttttaaaagattgttcggtgcttgttatggat
gaggctgacaagcttttgtctcaagagttccaaccttcagtggaacatttgattagcttt
cttccagaaagtcgtcagattttgatgttctcagccaccttccctgtcactgtcaaggat
tttaaggataggtttctgacgaatccttacgtcatcaatctcatggatgaacttacgctc
aagggtattacccaattctatgctttcgttgaagaaagacagaaaattcattgcttgaat
acactattctccaagctgcaaattaaccaatcaatcatattctgcaattctgtaaatcgt
gtggagctcttagccaagaaaatcacagaacttgggtattcatgcttttacatccatgca
aagatgcttcaagaccaccgaaacagagtgttccatgacttccggaatggtgcatgccgt
aatctcgtgtgtactgacttgttcacacgtggtattgacattcaagccgtcaatgtggtg
ataaactttgatttcccaaagaatgctgaaacttatctccatagggttggacgatcagga
aggtttggccatcttggtctagctgtgaatcttatcacctatgaagatcgatttaacctt
taccggattgagcaagagcttggaacggagatcaagcaaattcctccacatatcgatcag
gcaatttattgccaataa
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