Arabidopsis thaliana (thale cress): AT4G01270
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Entry
AT4G01270 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT4G01270
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT4G01270
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT4G01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-C3HC4_2
DUF4200
zf-RING_16
zf_RING_Vps8
RINGv
zf-C3HC4_3
Succ_DH_flav_C
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
828038
NCBI-ProteinID:
NP_192036
TAIR:
AT4G01270
UniProt:
Q9M143
A0A178V281
LinkDB
All DBs
Position
4:532247..534984
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AA seq
506 aa
AA seq
DB search
MAEENAAGNAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICK
QKCSLKDPCRLYFQSSGNQTDSIASDKVVGIEEDPVLLRGEVKRLEGKVQNLTSALEAKK
KENVEVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQERTV
ALAKELASLKLVSDLSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCN
QLGRGEARSSEKLEKALEKIEKLKKRMRELELITEERENRALRDINVSKKCSYTEVSEPA
IESMSSFRMLSSDNKVEKISTPPGKLEEKDGFTIQGSCLRGREDSFVSRTDSVIDVDDDY
VPETNTSGIRDWNTNIEEKGDNSMVKDIKFNIRKDPTSSVSPYSNGSGNIWQSSGTNRNL
GRWSKHGERNEATPSLGGSVPRKDDLISIGPDGKGGRIKVLRSKPQISKTNASSGSGKRF
KLGTKTSGSSSQGCLQIEHYFGKTNR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaaaacgcggcggggaatgcaatttgttcaatctgctacgaagatcttaaa
ccggtggttgagaatctgcaatcaatctccgcttgtggccatgtctttcacgaactttgt
ttgcagcaatggtttgagtattgcccgagtacgaacaagcgaaattgtccgatttgtaag
cagaagtgctctctaaaggatccttgtcgactttactttcagtcttctgggaatcaaacc
gattcgattgcctcggataaggttgttggaatcgaagaagatccggttttgttgagagga
gaagtgaagcggcttgaagggaaggtacagaatcttacttcggctctggaggcgaagaaa
aaggagaatgttgaagtctctgataagttgcatcaatgcaatgagcaattgaaggaggat
aaagtgaaaaggtgggaggctcttcaagaaatatcaacgactcagcatttgcttaagtta
aaatctgaggaatgtatccagcttaactcacagtgtgttaagctacaggagagaactgtg
gctcttgccaaggagctcgcatcgcttaaattggtttctgatttaagcttggaggaagat
gatgtactgaagttggccttgttggggaataacgcgaagacgaaagatacaatagacaca
ctagtcaagtccttggttattcggaataggagttataaggaattgctagccaagtgcaat
cagctgggaagaggcgaagcacgatcttctgagaaacttgaaaaagctttggaaaagata
gaaaaactaaagaaacgaatgagggaacttgagttgataactgaagagagagagaacaga
gctctacgggacataaacgtttcaaagaaatgcagttacacagaagtttccgagcctgca
atcgagagcatgtcttctttcagaatgctttcatcagacaacaaagtggagaaaatctcc
acaccacctggtaaattagaagaaaaggatggctttaccattcaaggatcatgcttaagg
ggaagagaagactccttcgttagcagaacagactcggttatagatgtagatgatgattat
gttcctgaaaccaacacttctggcattagagattggaatactaatattgaagagaaaggt
gataattccatggtgaaggatataaagttcaacatcagaaaagacccgacatcatcagtg
tcaccttacagcaatggtagtggaaacatttggcagtcaagtggaacaaatagaaacctt
ggtagatggagcaaacatggagagagaaacgaagcaactccatcactaggaggttctgtt
ccaagaaaagatgatctcatctctattggacctgatggtaaaggtggtagaatcaaagtg
ctgagatctaaaccccaaatttctaaaaccaatgcaagctcaggaagtggtaagagattc
aagcttggaactaaaacaagtggctcgtcctctcaaggttgtcttcagatagaacactat
ttcggaaaaactaatcgctaa
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