KEGG   Arabidopsis thaliana (thale cress): AT4G01270
Entry
AT4G01270         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G01270
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT4G01270
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT4G01270
SSDB
Motif
Pfam: zf-RING_2 zf-RING_UBOX zf-C3HC4 zf-rbx1 zf-ANAPC11 zf-RING_5 zf-RING_11 zf-C3HC4_2 DUF4200 zf-RING_16 zf_RING_Vps8 RINGv zf-C3HC4_3 Succ_DH_flav_C FlaC_arch
Other DBs
NCBI-GeneID: 828038
NCBI-ProteinID: NP_192036
TAIR: AT4G01270
UniProt: Q9M143 A0A178V281
LinkDB
Position
4:532247..534984
AA seq 506 aa
MAEENAAGNAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICK
QKCSLKDPCRLYFQSSGNQTDSIASDKVVGIEEDPVLLRGEVKRLEGKVQNLTSALEAKK
KENVEVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQERTV
ALAKELASLKLVSDLSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCN
QLGRGEARSSEKLEKALEKIEKLKKRMRELELITEERENRALRDINVSKKCSYTEVSEPA
IESMSSFRMLSSDNKVEKISTPPGKLEEKDGFTIQGSCLRGREDSFVSRTDSVIDVDDDY
VPETNTSGIRDWNTNIEEKGDNSMVKDIKFNIRKDPTSSVSPYSNGSGNIWQSSGTNRNL
GRWSKHGERNEATPSLGGSVPRKDDLISIGPDGKGGRIKVLRSKPQISKTNASSGSGKRF
KLGTKTSGSSSQGCLQIEHYFGKTNR
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggccgaagaaaacgcggcggggaatgcaatttgttcaatctgctacgaagatcttaaa
ccggtggttgagaatctgcaatcaatctccgcttgtggccatgtctttcacgaactttgt
ttgcagcaatggtttgagtattgcccgagtacgaacaagcgaaattgtccgatttgtaag
cagaagtgctctctaaaggatccttgtcgactttactttcagtcttctgggaatcaaacc
gattcgattgcctcggataaggttgttggaatcgaagaagatccggttttgttgagagga
gaagtgaagcggcttgaagggaaggtacagaatcttacttcggctctggaggcgaagaaa
aaggagaatgttgaagtctctgataagttgcatcaatgcaatgagcaattgaaggaggat
aaagtgaaaaggtgggaggctcttcaagaaatatcaacgactcagcatttgcttaagtta
aaatctgaggaatgtatccagcttaactcacagtgtgttaagctacaggagagaactgtg
gctcttgccaaggagctcgcatcgcttaaattggtttctgatttaagcttggaggaagat
gatgtactgaagttggccttgttggggaataacgcgaagacgaaagatacaatagacaca
ctagtcaagtccttggttattcggaataggagttataaggaattgctagccaagtgcaat
cagctgggaagaggcgaagcacgatcttctgagaaacttgaaaaagctttggaaaagata
gaaaaactaaagaaacgaatgagggaacttgagttgataactgaagagagagagaacaga
gctctacgggacataaacgtttcaaagaaatgcagttacacagaagtttccgagcctgca
atcgagagcatgtcttctttcagaatgctttcatcagacaacaaagtggagaaaatctcc
acaccacctggtaaattagaagaaaaggatggctttaccattcaaggatcatgcttaagg
ggaagagaagactccttcgttagcagaacagactcggttatagatgtagatgatgattat
gttcctgaaaccaacacttctggcattagagattggaatactaatattgaagagaaaggt
gataattccatggtgaaggatataaagttcaacatcagaaaagacccgacatcatcagtg
tcaccttacagcaatggtagtggaaacatttggcagtcaagtggaacaaatagaaacctt
ggtagatggagcaaacatggagagagaaacgaagcaactccatcactaggaggttctgtt
ccaagaaaagatgatctcatctctattggacctgatggtaaaggtggtagaatcaaagtg
ctgagatctaaaccccaaatttctaaaaccaatgcaagctcaggaagtggtaagagattc
aagcttggaactaaaacaagtggctcgtcctctcaaggttgtcttcagatagaacactat
ttcggaaaaactaatcgctaa

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