Arabidopsis thaliana (thale cress): AT4G02195
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Entry
AT4G02195 CDS
T00041
Symbol
SYP42
Name
(RefSeq) syntaxin of plants 42
KO
K08489
syntaxin 16
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
AT4G02195 (SYP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G02195 (SYP42)
Membrane trafficking [BR:
ath04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
AT4G02195 (SYP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
DUF2417
Peptidase_S64
POTRA_2
MCPsignal
M_C
DNA_pol_B_thumb
Motif
Other DBs
NCBI-GeneID:
827505
NCBI-ProteinID:
NP_567223
TAIR:
AT4G02195
UniProt:
Q9SWH4
Q0WNW7
A0A384L4D5
LinkDB
All DBs
Position
4:complement(969994..972342)
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AA seq
323 aa
AA seq
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MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDP
GPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVE
MLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKR
LQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQV
LGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVK
CATILLVLCLIMIVLLILKNILF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcgaacgacggtgtaccggaaacacagggatgcgtgtaagagcgcg
cgtgctccattatctttatcggcgtctgattcgttcggtggtccggtgatcgaaatggtt
agcggttcattttcccggtccaatcactcctcttatgctcctttgaattcctatgatcct
ggtccatcaagtagtgatgccttcacaattggtatgccaccagcttgggttgatgattct
gaggagataacttttaatatacaaaaggtgcgagacaaaatgaatgaactagcaaaggca
cattcaaaggctcttatgcctacatttggagataacaaagggattcatcgtgaagtcgag
atgctcactcatgagatcacagatttgttgaggaagtcagaaaagagattgcagatgtta
tctactagagggccttctgaagaatcaaatctcaggaaaaatgtgcagcgttctcttgca
acagatcttcagaacctttccatggagctccgcagaaaacagtctacttacttaaaacgt
ctgcagcagcagaaagagggtcaggatgaagtagatttagagtttaatgtgaatggaaag
atgtcgagactggatgaagaggatgaacttggtgggatgggtttcgatgaacaccagaca
atcaagttgaaggaagggcaacatgtctcagcggaaagggaacgagagatacaacaggtt
ctgggttccgtgaatgaccttgcacagataatgaaagacttatcagcccttgtgattgac
cagggcacgattgttgatcggatagactacaatgtccaaaacgtttctacatcggtcgag
gaaggctataaacaactacaaaaggcggagagaacacaaagagaaggagcaatggtgaaa
tgtgcaactatactccttgtactctgtttgatcatgattgttcttttaattcttaagaat
attttgttttag
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integrated database retrieval system
