Arabidopsis thaliana (thale cress): AT4G02220
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Entry
AT4G02220 CDS
T00041
Name
(RefSeq) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G02220
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
AT4G02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-GeneID:
828106
NCBI-ProteinID:
NP_567225
TAIR:
AT4G02220
UniProt:
Q93VB4
A0A178UYP9
LinkDB
All DBs
Position
4:976246..979163
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AA seq
418 aa
AA seq
DB search
MSSFNGDSMDDFKGLRITQLDDDDDDETAVEPINMDEFDDDDEEDDEDYEPVMLGFVESP
KFAWSNLRQLFPNLAGGVPAWLDPVNLPSGKSILCDLCEEPMQFVLQLYAPLTDKESAFH
RTLFLFMCPSMSCLLRDQHEQWKRAPEKAMRSTKVFRCQLPRANPFYSSEAPKHDGTDKP
LGHGAPLCTWCGTWKGDKLCSGCKNARYCSPKHQALHWRLGHKTECQQLRTVSETSDSGP
VNNGVAPTEKQKVASKSLWKEFVLINEDESEYDTEMSGDDEVAKPLVSKREVDDQMKSLM
NDFEGDADKKNWVNFQQRVDKAPEQVLRYSRSSGAKPLWPIASGRVSKSELPSCKSCGGP
RCFEFQVMPQLLFFFGGKNERESLDWATIVVYTCENSCDSSLSYKEEFVWVQLYSQTT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcttcaacggagactccatggatgatttcaaaggcctccgaataactcagctt
gatgatgatgacgatgatgaaactgcggtggaacctataaatatggatgaatttgatgat
gatgatgaggaagatgatgaagattatgaacctgtgatgttaggtttcgttgagagtcct
aaattcgcatggtcaaatcttcgtcaactgttccctaatttagctggtggtgttccggca
tggttggatccagttaatttaccatcagggaagtcaattctatgtgatctatgtgaagaa
cctatgcaatttgtacttcaactttatgctcctttaacagacaaggaatcagcttttcat
cggacattgtttctcttcatgtgtccatctatgtcttgtctccttcgtgatcaacatgaa
caatggaaacgtgccccagagaaggctatgcggagtacgaaggttttccgttgccaattg
cctcgagctaatcctttttactcgagtgaggctccaaagcacgatggaacagacaagcca
ttgggtcatggagctccgctttgcacttggtgtggaacatggaaaggagataaactatgt
agcggctgcaaaaatgctcgatactgttcaccgaaacaccaggccctgcattggcgcttg
ggtcataaaaccgaatgccaacagcttcgaacggttagcgaaacatctgactcaggccct
gtcaataatggggttgctccaactgaaaagcagaaagttgcgagtaagagtttatggaaa
gaatttgtattgatcaatgaggatgaaagtgagtatgatactgagatgtcaggagatgat
gaagtagctaaacctttggtctcaaagagagaagttgacgaccaaatgaaatcgctaatg
aacgattttgagggagatgctgataaaaagaattgggttaatttccagcaacgcgtagac
aaagcccctgaacaagttctgagatattcccggagctctggtgctaaacccctttggcca
atagcaagcggacgagtctctaaatctgagcttcccagttgcaaatcttgtggtggtcct
cgttgttttgaatttcaggtgatgccgcagctactgttcttcttcggtgggaagaacgag
agggaatctctcgattgggcaacaatcgtggtgtacacttgtgagaactcgtgtgactcg
agcttaagttacaaggaagagtttgtctgggttcaactatacagtcagacaacttag
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