Arabidopsis thaliana (thale cress): AT4G02400
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Entry
AT4G02400 CDS
T00041
Name
(RefSeq) U3 ribonucleoprotein (Utp) family protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT4G02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G02400
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AT4G02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
828039
NCBI-ProteinID:
NP_567232
TAIR:
AT4G02400
UniProt:
F4JHI1
LinkDB
All DBs
Position
4:1054199..1057998
Genome browser
AA seq
855 aa
AA seq
DB search
MGEKRKSTSKTLAKNKKRKGPHLPNSILKTIANEKRPLNSDEDDDEIDSDDENVDLYEYE
EGVPEEESKKNNRYDRVDNYDYELPEDFEDENVESDDDEDGGNSENEEGEGDDDRHTRML
QGLTGMPSAAFQEESKKRPVLYTEAYPESEFNPTRDVLEGKGLISVEDLLAPLEGKPGFN
DLNKRINRMQKDTQSVVHAPLPKPERERLERKAVKGLVEKDFNKWVHLVKRNREAPTVYF
NQPVNVGYSTVGAIASEFQPRTEFEKKMASVLKDNELGEAHKEDGAKLLELNEVSMEDHI
KYRDHIAKMRSLLFRHELKSKRIKKIKSKTYHRLKGKDLKKSAMGALMDPEMAKEEAIKQ
ETRRVEERMTLKHKNTGKWAKRMLSRGLTERYDGTRAAISEQLQINATLSRKMNSTNDGS
SSDESDDEEELSCGSDQDTPSKLIAKAREKTLKTMEDDDVPNSGLLSLPFMARAMKKKNE
EANEEAKRAFGEYKELENFGGEDNPKKSADVSGRRVFGATSKVEAPKESKKDSDNFYDNS
DSDNDMEGIENNDLGAVGDTASPARNTGAITETEKCCGDVENPASKTTFDVALFASGSWK
KMKGSQNAESKKAPKTRVPISKGQDKKESRDEESEDSESEAEQMVDGILTSASKETYEIP
SQAELIQRAFAGDDVVEEFEKDKQEVLNQEVPEPEKPVLVPGWGQWTNVQKKRGLPSWMV
REHEDANKKRKLDLKTRKDYRLRNVIISEKVDKKADKLHTTTLPFPYTSKEVFEHSMRMP
IGPEFNPATIVGALNRPEVVKKAGVIIKPVKFEEVNPNEKADDENPRSHQKQRPKKGSKT
SKGQGKNKSKLKTKA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaagagaaaatctacttcgaaaaccctagctaagaacaagaagaggaaaggt
cctcatttgcctaattcaatcctgaagactattgccaatgagaaacgtcctttgaactct
gacgaagatgacgatgagatcgattccgacgatgaaaacgtcgatttgtatgagtatgaa
gaaggtgtgcctgaggaagagtctaagaaaaacaatcgctatgaccgcgtcgataactac
gactacgagcttcccgaggatttcgaggatgaaaatgtggagtcagatgatgatgaagat
ggtggaaacagcgagaatgaggaaggtgaaggtgatgacgatagacacacacggatgttg
caaggtctcactggaatgccaagtgctgcctttcaagaagagagtaagaagagacctgta
ctctatactgaagcgtatccagagtctgaattcaatcctacccgtgatgttctggagggt
aaaggcctcatctcagttgaggaccttttggcgcctcttgaaggaaaacctgggtttaac
gatctaaataagaggatcaaccggatgcagaaagatactcagtctgttgttcatgcacct
ttgcctaagccagaacgagaaagactagagcggaaagctgtgaaaggactagttgagaag
gactttaataagtgggtgcatctggtcaagaggaatagggaggcaccaactgtttacttt
aatcaacctgtcaatgttgggtattctacagtcggtgcaatagcatcagagtttcaaccc
aggactgaatttgagaagaaaatggcttctgtactcaaagataacgagcttggggaggct
cacaaagaagatggcgctaagcttcttgaattgaatgaggtgtcgatggaagaccacatc
aagtaccgtgaccacattgccaagatgcggagcctgctattccgccatgaactgaaaagt
aaacgtatcaagaagattaagtctaaaacttatcatcgccttaaagggaaggacctgaag
aaatcagcgatgggagcattaatggacccagaaatggctaaagaagaggctattaagcag
gagactagacgagtagaggaacggatgactttgaagcacaaaaacacaggaaaatgggcc
aaacgcatgttaagccgtggactgactgagagatatgatggaactagggcagctatatct
gaacaacttcagattaatgctactttgtccagaaagatgaactccacgaacgatggaagt
agtagtgatgagagcgacgatgaggaagagttgagttgtggttcagatcaggatactcct
tctaaattgatagcgaaagccagggagaagacactgaaaactatggaagatgatgatgta
cccaattctggtcttctttcattacctttcatggctcgtgctatgaaaaagaaaaatgag
gaagctaatgaagaagctaaacgtgcatttggggagtataaagaattggagaattttggt
ggagaagataatcctaaaaaatccgctgatgttagtggtagaagagtatttggtgccacc
tctaaagtcgaagctccaaaagagtctaaaaaggactcggacaatttttatgacaacagt
gatagtgacaatgatatggaaggtatagaaaataatgaccttggggctgttggagatact
gcttcacctgctagaaacactggagccataacagagaccgagaagtgttgtggtgatgtt
gaaaatccagcttctaagacaacatttgatgttgccttatttgcgtcaggctcttggaag
aagatgaaaggctcccaaaatgcagaatccaaaaaagctccaaagactcgtgtaccaatc
tcaaagggccaagataaaaaggaatcgagagatgaagaaagtgaagattcagagagtgaa
gctgagcaaatggttgatgggattttgacatctgcttcgaaggagacctatgaaatccct
tctcaagcagagcttatacaacgtgcttttgctggtgatgacgttgtagaagaatttgag
aaggataagcaagaagttctaaatcaggaagttcctgaaccggaaaagccggttctagtt
cctggttggggacaatggaccaatgtccaaaagaagagaggtttaccttcatggatggtt
agagaacatgaagatgcaaataaaaagagaaagctagatctcaaaacaaggaaagactat
cgtctcagaaatgttatcatatcagagaaagtcgataaaaaggctgacaaacttcataca
acgactctacctttcccatatacatctaaggaagttttcgaacacagcatgcgcatgcct
ataggacccgagtttaatcctgcgactattgttggagctctcaaccgacccgaggttgtg
aagaaagctggtgtgataattaaaccggtcaaatttgaggaagtgaatccaaacgagaaa
gcagatgacgaaaaccctcgaagccatcaaaaacaaagacccaaaaagggtagtaaaacc
agtaaaggtcaaggcaaaaacaagtccaagctaaagaccaaagcttag
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