KEGG   Arabidopsis thaliana (thale cress): AT4G03020
Entry
AT4G03020         CDS       T00041                                 
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G03020
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     AT4G03020
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Cytochrom_D1 Beta-prop_SCAP Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 828111
NCBI-ProteinID: NP_001328634
TAIR: AT4G03020
UniProt: Q8LPI5 A0A384L310
LinkDB
Position
4:complement(1331399..1335463)
AA seq 493 aa
MFFGPSEFDADEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVT
KLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPW
LVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLS
PDQRNLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTD
GREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD
RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV
LRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGS
NDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAPI
MSKKRVRRRHFYY
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgttttttggaccaagtgagtttgatgctgatgaaatgggttatgcaatgagtagactt
gagatagaatccgatctatgtgatactggaaaagacgtttgtggagttggtagtagtagt
ggtagtcacagatcaagtgaacatttggctgatctagaccatgaaatcagccaggttact
aaattgaaatctagtcctcatcaacggtatagccgtgaagtccctgggagacatcagtta
cctgtgtctactgtgaggatgttggcaggtcgagaaagtaatttctctggaagaggaagg
ttttcagccgctgattgttgccatatgctaagcagatatttgcctacaaaaggtccttgg
cttgtagatcaaatggacagccgagcatatgtctctcagttttcaactgatggttctctc
tttattgcggggtttcagggtagccgtattcggatttacaatgtagagaagggttggaaa
gttcaaaaggatattcttgcaaaaagcttgcgttggactgttactgatacttctctatcc
cctgatcagcgaaatctggtttacgcaagcatgtcacctattgttcacattgttgatgtt
ggatccggttcaaccgagtctcatgcaaatgttacggagatccatgatggcttagacttc
tcttctgatgaagatggagggtactcttttggaatattctctgtgaaattttcaacagat
ggccgagaagttgttgctgggagcagtgatgattccatttatgtttatgaccttgaagca
aatcgagtttcactccggactgttgcacacacgtctgatgtaaatactgtgtgctttgct
gatgaaagtgggaacctgattttatctggaagtgatgataatctctgcaaagtgtgggat
aggcgttgtttcattgggagagataagccagctggtgttttagtgggacacctcgaaggt
gttacctttatcgatagccgtggagatggtcgctatttcatatcaaatggtaaagaccaa
actatcaaattgtgggatatcagaaaaatgtcctcaagcgcacctgcaaggcatgaggtg
ctaagaaactatgaatgggactacagatggatggattatcctactgaagcaagagatcta
aagcacccactcgatcagtcagtgtcgacatataaaggtcactcagttttgcgtactctc
atccgttgttacttctctccagcgcatagtactggccaaaagtacatctacacaggatcg
aacgacagttccgtctacatatacgacttggtaagtggagataaagtggcagtgctaaag
caccatagctcacctgtaagagactgtaattggcacccatattacccaacgcttataagc
tcttcgtgggacggagatcttgtgaagtgggaatttccggggagcggtgaggcgccgatt
atgagtaagaagagggttcgaaggagacatttctactactga

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