Arabidopsis thaliana (thale cress): AT4G03430
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Entry
AT4G03430 CDS
T00041
Symbol
EMB2770
Name
(RefSeq) pre-mRNA splicing factor-like protein
KO
K12855
pre-mRNA-processing factor 6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G03430 (EMB2770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G03430 (EMB2770)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AT4G03430 (EMB2770)
Complex C
U5 SnRNP specific factors
AT4G03430 (EMB2770)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_2
TPR_17
TPR_CcmH_CycH
ARM_TT21
FAT
Motif
Other DBs
NCBI-GeneID:
827925
NCBI-ProteinID:
NP_001319859
TAIR:
AT4G03430
UniProt:
Q9ZT71
LinkDB
All DBs
Position
4:complement(1516030..1520563)
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AA seq
1029 aa
AA seq
DB search
MVFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDS
DSILLSDLGVSRFSTVIIHVLLLGGMQAAPPKPRLDFLNSKPPSNYVAGLGRGATGFTTR
SDIGPARAAPDLPDRSALATAAAPGVGRGAGKPSEAEAEDDEEAEEKRYDENQTFDEFEG
NDVGLFANAEYDEDDKEADAIWESIDQRMDSRRKDRREAKLKEEIEKYRASNPKITEQFA
DLKRKLHTLSADEWDSIPEIGDYSLRNKKKKFESFVPIPDTLLEKAKKEKELVMALDPKS
RAAGGSETPWGQTPVTDLTAVGEGRGTVLSLKLDNLSDSVSGQTVVDPKGYLTDLKSMKR
TTDEEIYDRNRARLLYKSLTQSNPKNPNGWIAAARVEEVDGKIKAARFQIQRGCEECPKN
EDVWLEACRLANPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLEHIPD
SVRLWKAVVELANEEDARILLHRAVECCPLHLELWVALARLETYAESKKVLNKAREKLPK
EPAIWITAAKLEEANGKLDEANDNTAMVGKIIDRGIKTLQREGVVIDRENWMSEAEACER
VGSVATCQAIIKNTIGIGVEEEDRKRTWVADADECKKRGSIETARAIYAHALSVFLTKKS
IWLKAAQLEKSHGSRESLDALLRKAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAY
AAIPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEER
RLLNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEK
VNGLNKARAILTTARKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWA
ADIEMAPRPRRKTKSIDAMKKCDRDPHVTIAVAKLFWQDKKVEKARAWFERAVTVGPDIG
DFWALFYKFELQHGSDEDRKEVVAKCVACEPKHGEKWQAISKAVENAHQPIEVILKRVVN
ALSKEENSA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctctcgattccaaacgggaagactttatcgatcgacgtgaaccctaattca
accaccatctccgccttcgaacaattggcccaccaacgtagtgatgttccacaatctttc
cttcgttactctctccgtatgcgaaaccctagccgcgtgtttgtagattcaaaggattcc
gattcgatcttattgtccgatctcggtgtttctcgtttctctactgtgattatccatgtc
ctgcttttgggtggtatgcaagcggctccgccgaagcctcgtcttgatttcctcaattct
aagcctccgtcaaattatgtagcgggtttgggtcgtggtgctactgggtttactactcga
tctgatattggtcctgctcgtgctgctccggatcttcctgatcggtctgctttggctaca
gcggctgctccaggagtaggtcgtggagcagggaagccaagtgaagcggaagcggaggac
gatgaagaagctgaggagaaaaggtacgatgagaatcagacgtttgatgagtttgaaggg
aatgatgttggtttgttcgctaatgctgagtacgatgaggatgataaagaggctgatgcc
atctgggagtctattgatcagaggatggattcgaggaggaaagatcggagagaagcgaag
ctgaaggaagaaatcgagaaataccgagcctcgaaccctaagattactgagcagtttgcg
gatttgaagaggaaattacacactttgtctgcggatgagtgggatagtattcctgagatt
ggggattactcgctgaggaacaagaagaagaagtttgagagctttgtgcctattcctgat
acgcttttggagaaggcgaagaaagaaaaggagcttgtcatggccttagacccaaagagc
agagccgctggtgggtcggagacaccatgggggcagacgccggtgacagacttgactgct
gtcggtgagggaagaggtacggtgttgtctctgaagcttgataacctatcagattcagtt
tcggggcaaactgtagtggatcctaaaggctacttaactgacctgaagagtatgaaaaga
accactgatgaagagatatacgatcgcaatagagctagattgttatacaagagtctgacc
cagtcgaatccaaagaatccaaatggctggattgctgctgctagagtggaggaggtggat
gggaagattaaagcagctaggtttcagattcagaggggctgcgaagagtgcccgaaaaat
gaggatgtttggcttgaagcttgtaggttagctaatccagaagatgccaagggggttatt
gcgaagggagttaagctgatacccaattcagtgaagctatggttggaggctgcaaagctg
gagcatgatgtggagaacaagagtagggtgttgagaaagggactggaacatattccagac
tctgtaagactatggaaggctgttgttgagttggctaatgaggaggatgcaaggattttg
cttcacagggctgtggagtgctgccctttgcatctggagctatgggtggcacttgcgagg
ctcgaaacatatgctgaatcaaagaaggtgttgaacaaagcgagagagaagctcccaaag
gagcctgcaatttggatcaccgctgctaagttagaagaagctaatgggaagctagatgaa
gctaatgataacacggctatggtgggaaagattattgataggggtataaagactctccag
agagaaggggttgttattgaccgagaaaattggatgagtgaggctgaggcatgtgagaga
gttggatctgtcgctacatgccaggccattattaagaacacaataggtattggagtggaa
gaagaggatagaaagagaacttgggttgctgatgcagatgagtgcaagaagaggggttcc
attgagaccgcaagagcaatatacgcccatgctcttagtgtattcttgaccaagaaaagt
atctggcttaaagcggcgcagcttgagaagagccatgggagtcgggagtcccttgatgcc
ttgttgcgtaaggctgtaacatatgtcccgcaagctgaggttctctggctcatgggtgcc
aaagagaagtggctcgctggagatgttccagcagcccgtgctattctacaagaggcttat
gctgcaattcccaactctgaggaaatctggcttgctgctttcaagcttgagtttgagaac
aaggagccggagagggcaagaatgctgcttgcaaaagcaagggaaagaggagggactgaa
agggtctggatgaaatcagccattgttgagagagaacttggcaacgtagaggaggagagg
agattgcttaatgaaggtttgaagcaattcccaacattcttcaagctttggttaatgctt
gggcagctcgaggaacggttcaagcatctagaacaggccaggaaagcttatgacactggt
ttgaagcactgtccccactgcataccactgtggctctcactcgctgatcttgaagagaaa
gtgaatgggctaaacaaagctcgggctattctcaccacggccaggaagaagaatcctggg
ggggctgagctatggttagctgctattcgcgctgaactgaggcatgacaacaagagagaa
gcagagcacttgatgtcaaaggctctgcaagactgtcccaagagtggtatcctctgggct
gcggacattgagatggcgccacgtcctcgacggaaaacaaagagtattgatgctatgaag
aagtgtgatcgcgaccctcatgtcaccatagctgttgccaagctcttttggcaagacaag
aaggtggagaaagccagagcatggtttgaacgtgctgttaccgttggcccagatattggc
gatttctgggcgttgttctacaaatttgaacttcaacatggctctgatgaggacaggaag
gaagttgtggcgaagtgtgtagcttgtgagccgaagcatggcgagaaatggcaagccatc
tccaaagcggttgaaaatgctcaccagcctattgaagttatcttgaagagagttgtgaat
gcgttgagcaaggaagagaattctgcttga
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integrated database retrieval system
