Arabidopsis thaliana (thale cress): AT4G03560
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Entry
AT4G03560 CDS
T00041
Symbol
TPC1
Name
(RefSeq) two-pore channel 1
KO
K16900
two pore calcium channel protein, plant
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ath04040
]
AT4G03560 (TPC1)
Ion channels [BR:
ath04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
AT4G03560 (TPC1)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_6
EF-hand_1
RPN13_C
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
825655
NCBI-ProteinID:
NP_567258
TAIR:
AT4G03560
UniProt:
Q94KI8
B9DFD5
Structure
PDB
PDBj
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All DBs
Position
4:1579929..1585980
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AA seq
733 aa
AA seq
DB search
MEDPLIGRDSLGGGGTDRVRRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGES
ARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAES
IIYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFD
FLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFED
TQQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLI
LAVVYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTL
PKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALS
QQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMA
LKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLR
LIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFE
TELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITI
LLLLNLVVAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKSRSQRVDTLLHHMLG
DELSKPECSTSDT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccgttgattggtagagatagtcttggtggtggtggtacggatcgggttcgt
cgatcagaagctatcacgcatggtactccgtttcagaaagcagctgcactcgttgatctg
gctgaagatggtattggtcttcctgtggaaatacttgatcagtcgagtttcggggagtct
gctaggtattacttcatcttcacacgtttggatctgatctggtcactcaactatttcgct
ctgcttttccttaacttcttcgagcaaccattgtggtgtgaaaaaaaccctaaaccgtct
tgcaaagatagagattactattacctgggagagttaccgtacttgaccaatgcagaatcc
attatctatgaggtgattaccctggctatactccttgtacatactttcttcccgatatcc
tatgaaggttcccgaatcttttggactagtcgcctgaatctagtgaaggttgcttgcgtg
gtaattttgtttgttgatgtgctggttgactttctgtatctgtctccactggctttcgac
tttctcccttttagaatcgccccatacgtgagagttatcatattcatcctcagcataagg
gaacttcgggacacccttgtccttctgtctggaatgcttggcacatacttgaatatcttg
gctctatggatgctgttccttctatttgccagttggattgcttttgttatgtttgaggac
acgcagcagggcctcacggtcttcacttcatatggtgcaactctttaccagatgtttatt
ttgttcacaacatccaacaatcctgatgtctggattcctgcatacaagtcttctcgctgg
tcttcggtgttcttcgtgctctacgtgctaattggcgtctactttgtcacaaacttgatt
cttgccgttgtttatgacagtttcaaagaacagctcgcaaagcaagtatctggaatggat
caaatgaagagaagaatgttggagaaagcctttggtcttatagactcagacaaaaacggg
gagattgataagaaccaatgcattaagctctttgaacagttgactaattacaggacgttg
ccgaagatatcaaaagaagaattcggattgatatttgatgagcttgacgatactcgtgac
tttaagataaacaaggatgagtttgctgacctctgccaggccattgctttaagattccaa
aaggaggaagtaccgtctctctttgaacattttccgcaaatttaccattccgccttatca
caacaactgagagcctttgttcgaagccccaactttggctacgctatttctttcatcctc
attatcaatttcattgctgtcgttgttgaaacaacgcttgatatcgaagaaagctcggct
cagaagccatggcaggttgccgagtttgtctttggttggatatatgtgttggagatggct
ctgaagatctatacatatggatttgagaattattggagagagggtgctaaccgatttgat
tttctagtcacatgggtcatagttattggggaaacagctaccttcataactccagacgag
aatactttcttctcaaatggagaatggatccggtaccttctcctggcgagaatgttaaga
ctgataaggcttcttatgaacgtccagcgataccgagcatttattgcgacgttcataact
cttattccaagtttgatgccatatttagggaccattttctgcgtgctgtgtatctactgc
tctattggcgtacaggtctttggagggcttgtgaatgctgggaacaaaaagctctttgaa
accgaattggctgaggatgactaccttttgttcaacttcaatgactaccccaatggaatg
gtcacactcttcaatctgctagttatgggtaactggcaagtatggatggagagctacaaa
gatttgacgggcacgtggtggagcattacatatttcgtcagtttctatgtcatcactatt
ttacttctgttgaatttggttgttgcctttgtcttggaggcgttctttactgagctggat
cttgaagaagaagaaaaatgtcaaggacaggattctcaagaaaaaagaaacaggcgtcga
tctgcagggtcgaagtctcggagtcagagagttgatacacttcttcatcacatgttgggt
gatgaactcagcaaaccagagtgttccacttctgacacataa
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