Arabidopsis thaliana (thale cress): AT4G05000
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Entry
AT4G05000 CDS
T00041
Symbol
VPS28-2
Name
(RefSeq) Vacuolar protein sorting-associated protein VPS28 family protein
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT4G05000 (VPS28-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G05000 (VPS28-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G05000 (VPS28-2)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
AT4G05000 (VPS28-2)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT4G05000 (VPS28-2)
Exosomal proteins of other body fluids (saliva and urine)
AT4G05000 (VPS28-2)
Exosomal proteins of colorectal cancer cells
AT4G05000 (VPS28-2)
Exosomal proteins of bladder cancer cells
AT4G05000 (VPS28-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
825842
NCBI-ProteinID:
NP_001328317
TAIR:
AT4G05000
UniProt:
Q9S9T7
A0A178V397
LinkDB
All DBs
Position
4:2563040..2564835
Genome browser
AA seq
210 aa
AA seq
DB search
MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTL
SATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQ
NFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAAD
ELTEQQSRQLHFDLESSYNSFMAALPKAGN
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtcaaattatggaacgacaaacgcgaaagagagatgtatgagaattttgca
gagctttttgcaatcatcaaagccacagagaagctagagaaagcttatataagagaccta
atcaatccttcagagtacgaatctgaatgccagaaactcattgtccacttcaaaacttta
tccgctacactcaaagacacggtgccaaacattgaaagatttgcagacacatacaaaatg
gactgtccagctgctctataccgcctggtgacatcaggtcttcctgccacagtggaacac
cgagctaccgttgcagcatctacgtcgaactctgcatccattgttgctgaatgtgtacag
aatttcatcacttcaatggattctttgaaactaaacatggtggctgtcgatcaggtttat
cctctcttgtctgatctatctgcttctctcaacaaactgagtattctaccgcccgatttc
gaagggaagacgaagatgaaagaatggctttcgaggttgtctaagatgggagcagccgat
gagcttacggaacaacagtcaaggcaacttcactttgatctcgagtcatcatacaactct
ttcatggcagctttgcctaaagctggtaattaa
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integrated database retrieval system
