KEGG   Arabidopsis thaliana (thale cress): AT4G05050
Entry
AT4G05050         CDS       T00041                                 
Symbol
UBQ11
Name
(RefSeq) ubiquitin 11
  KO
K08770  ubiquitin B/C
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT4G05050 (UBQ11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G05050 (UBQ11)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G05050 (UBQ11)
Ubiquitin system [BR:ath04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   AT4G05050 (UBQ11)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AT4G05050 (UBQ11)
  Exosomal proteins of other body fluids (saliva and urine)
   AT4G05050 (UBQ11)
  Exosomal proteins of colorectal cancer cells
   AT4G05050 (UBQ11)
  Exosomal proteins of bladder cancer cells
   AT4G05050 (UBQ11)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD DUF2604 Dsc3_N Ubiquitin_5 UBL_UBAC1 OTU1_UBXL
Other DBs
NCBI-GeneID: 825847
NCBI-ProteinID: NP_567286
TAIR: AT4G05050
UniProt: P0CH33 Q3E7T8 Q8H0Y0
LinkDB
Position
4:complement(2588004..2589437)
AA seq 229 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatcttcgttaagactctcaccggaaagactatcaccctcgaggtggaaagctct
gacaccatcgacaacgttaaggccaagatccaggataaggaaggtattcctccggatcag
cagaggcttatcttcgccggaaagcagttggaggatggccgcacgttggcggattacaat
atccagaaggaatccaccctccacttggttctcaggctccgtggtggtatgcagattttc
gttaaaaccctaacgggaaagacgattactcttgaggtggagagctctgacaccattgac
aacgtcaaggccaagatccaagataaggagggtattcctccggaccagcagaggttgatc
ttcgccggaaagcaacttgaggacggcagaactttggcggattacaacatccagaaggag
tctacgcttcatttggtcttgcgtctgcgtggaggtatgcagatcttcgtaaagactttg
accggaaagaccatcactcttgaagttgagagctccgacaccattgataacgtgaaggct
aagatccaggacaaggaaggcattcctccggaccagcagcgtctcatcttcgctggaaag
cagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttcac
ttggtcctccgtctccgtggtggtttctaa

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